Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC012616.1-201ENST00000600294 197 ntBASIC4.66□□□□□ -1.66
LRRC28Q86X40 AP000769.2-201ENST00000602344 396 ntBASIC4.66□□□□□ -1.66
LRRC28Q86X40 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRC28Q86X40 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRC28Q86X40 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRC28Q86X40 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRC28Q86X40 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRC28Q86X40 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRC28Q86X40 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LRRC28Q86X40 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.65□□□□□ -1.66
LRRC28Q86X40 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.65□□□□□ -1.66
LRRC28Q86X40 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRRC28Q86X40 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AC013442.1-201ENST00000397347 228 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 RPL36AP10-201ENST00000421785 322 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 OR6D1P-201ENST00000436165 939 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 GAPDHP58-201ENST00000438477 1006 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 NPM1P33-201ENST00000438918 872 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 DNAJB5P1-201ENST00000454004 806 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 RPL35AP19-201ENST00000469425 329 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 RN7SKP46-201ENST00000515942 234 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 RNA5SP303-201ENST00000516192 130 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 RN7SKP99-201ENST00000517028 307 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AC009027.1-201ENST00000604510 479 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 AC018695.5-201ENST00000605872 315 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 AP000864.1-201ENST00000609424 650 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 AC007204.2-201ENST00000615022 616 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 MIR8080-201ENST00000622224 89 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AL138820.1-201ENST00000617901 5305 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRRC28Q86X40 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRRC28Q86X40 CIR1P2-201ENST00000514821 1342 ntBASIC4.65□□□□□ -1.67
LRRC28Q86X40 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.65□□□□□ -1.67
LRRC28Q86X40 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRC28Q86X40 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC083843.3-201ENST00000623679 2186 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRRC28Q86X40 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC023421.1-201ENST00000590535 1785 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRC28Q86X40 RN7SKP162-201ENST00000363605 345 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRC28Q86X40 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 SETP10-201ENST00000424368 814 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 RPL12P17-201ENST00000432393 498 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 MRPL35P2-201ENST00000448009 511 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 BX842559.2-201ENST00000451418 605 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 RANP1-206ENST00000455094 651 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC007386.1-201ENST00000455212 582 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 AL133445.1-201ENST00000467051 452 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 RN7SL547P-201ENST00000490793 290 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 SCARNA21.2-201ENST00000516600 166 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 RN7SL356P-201ENST00000582228 248 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 AL359513.1-201ENST00000614364 557 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 AL118522.2-201ENST00000616045 615 ntBASIC4.64□□□□□ -1.67
LRRC28Q86X40 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRC28Q86X40 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRC28Q86X40 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRC28Q86X40 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
LRRC28Q86X40 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms