Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 MIR492-201ENST00000638676 116 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 SLC25A18P1-201ENST00000449385 454 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 RN7SL558P-201ENST00000497468 299 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AC025031.4-201ENST00000621248 3271 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AL356387.2-201ENST00000422272 243 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 RPL7AP61-201ENST00000443410 636 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 RN7SL443P-201ENST00000464331 290 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 HNRNPRP2-201ENST00000528421 743 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AL049794.2-201ENST00000616301 365 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AL672167.1-205ENST00000641112 3080 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 TCP11X1-202ENST00000622971 1372 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AC084783.1-201ENST00000565846 910 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 AC090506.2-201ENST00000624521 419 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS13CQ709C8 RNU6-761P-201ENST00000384148 107 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 RCC2P2-201ENST00000422174 918 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS13CQ709C8 AL023881.1-201ENST00000621088 301 ntBASIC3.97□□□□□ -1.77
VPS13CQ709C8 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
VPS13CQ709C8 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC3.96□□□□□ -1.77
VPS13CQ709C8 TRAV35-201ENST00000390462 330 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 FABP7P1-201ENST00000424004 391 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC108751.3-201ENST00000461814 1020 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 AP000619.2-201ENST00000546014 969 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC090017.1-201ENST00000548612 1779 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC027807.1-201ENST00000559921 996 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC015712.7-201ENST00000615211 635 ntBASIC3.96□□□□□ -1.78
VPS13CQ709C8 NHS-204ENST00000615422 8860 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS13CQ709C8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VPS13CQ709C8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms