Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AL589826.1-201ENST00000340697 249 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC010385.1-201ENST00000412374 256 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC013404.1-201ENST00000413068 249 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AL035422.1-201ENST00000414193 397 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 HMGN1P2-201ENST00000445197 310 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 RPL31P44-201ENST00000447680 377 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 MTND5P8-201ENST00000449817 1083 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 RNU1-88P-201ENST00000459274 128 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 NDUFA5P5-201ENST00000468361 342 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC093663.2-201ENST00000484625 313 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 SNX18P24-201ENST00000505249 671 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 RNU6-513P-201ENST00000516104 104 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 RN7SKP141-201ENST00000516167 338 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 OR56A7P-201ENST00000524865 941 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC027369.2-201ENST00000528030 440 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 PDCD5P1-201ENST00000543528 309 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC008507.3-201ENST00000585753 472 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC141002.1-201ENST00000607025 279 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC092681.3-201ENST00000609463 678 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AL365181.4-201ENST00000609800 547 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 RN7SL261P-201ENST00000613441 282 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC015712.7-201ENST00000615211 635 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 OR2L1P-202ENST00000641567 1023 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 NEAT1-202ENST00000501122 22743 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 AC009962.1-201ENST00000567327 3813 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 PHKBP1-201ENST00000450951 1951 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 DDX18P4-201ENST00000511690 1966 ntBASIC5.02□□□□□ -1.61
C11orf88Q6PI97 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.02□□□□□ -1.61
C11orf88Q6PI97 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 IGKV7-3-201ENST00000357453 298 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 AC004386.1-201ENST00000393214 761 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 OR7E156P-201ENST00000400303 464 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 FAM204CP-201ENST00000424489 642 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 AC130360.1-201ENST00000425489 1117 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 PTP4A1P3-201ENST00000433661 420 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 AC242426.1-201ENST00000435270 960 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 AMYP1-201ENST00000440059 1023 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 RPL5P25-201ENST00000441148 775 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 FRG2FP-204ENST00000453982 852 ntBASIC5.01□□□□□ -1.61
C11orf88Q6PI97 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.01□□□□□ -1.61
C11orf88Q6PI97 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms