Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC097460.3-201ENST00000623099 442 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 MTND2P41-201ENST00000637599 773 ntBASIC5.4□□□□□ -1.54
ZNF549Q6P9A3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ZNF549Q6P9A3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.4□□□□□ -1.55
ZNF549Q6P9A3 AC130360.2-201ENST00000533477 1556 ntBASIC5.4□□□□□ -1.55
ZNF549Q6P9A3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
ZNF549Q6P9A3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ZNF549Q6P9A3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ZNF549Q6P9A3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ZNF549Q6P9A3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ZNF549Q6P9A3 Z83820.1-201ENST00000456978 1499 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 RNA5SP510-201ENST00000364697 99 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 RNU6-609P-201ENST00000365459 107 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 RNA5SP122-201ENST00000384457 108 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC079809.1-201ENST00000415468 276 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 MTCO2P23-201ENST00000425216 680 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC017019.1-201ENST00000426129 261 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 KCTD9P1-201ENST00000430462 1167 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 RPL12P11-201ENST00000439970 501 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 OR6C72P-201ENST00000451403 892 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 RPL5P23-201ENST00000496040 868 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC021146.5-201ENST00000503544 545 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC109464.1-201ENST00000511091 819 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC021193.1-201ENST00000511607 420 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC074087.1-201ENST00000512059 724 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 VTA1P2-201ENST00000520205 911 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC093510.2-201ENST00000562820 896 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC098935.2-201ENST00000604222 466 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AL450270.1-201ENST00000606160 391 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC006386.1-201ENST00000619436 415 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 uc_338.7-201ENST00000621834 124 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC132068.1-201ENST00000623805 459 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC063952.1-203ENST00000634410 658 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 AC083837.1-201ENST00000565297 2994 ntBASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ZNF549Q6P9A3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 DBIP1-201ENST00000401435 260 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 ELOCP13-201ENST00000443934 329 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AP000281.1-201ENST00000444036 316 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 HMGN1P36-201ENST00000446623 298 ntBASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.38□□□□□ -1.55
ZNF549Q6P9A3 AP002371.1-201ENST00000463604 433 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms