Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC117529.2-201ENST00000512159 2068 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC018688.1-201ENST00000636528 1754 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC023818.2-201ENST00000623817 2304 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 OR4K15-201ENST00000305051 1216 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AL139805.1-201ENST00000407837 289 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 MIR548P-201ENST00000408336 84 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 RN7SKP254-201ENST00000410685 310 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 RAB28P1-201ENST00000411517 641 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC069157.1-201ENST00000421749 137 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AL606490.7-201ENST00000433136 191 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 Z83313.1-201ENST00000433780 718 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 NPM1P18-201ENST00000434232 732 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 COL11A2P1-205ENST00000441798 676 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 ARPC3P5-201ENST00000448802 534 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC140076.1-201ENST00000449897 361 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC079776.3-201ENST00000450665 370 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 OR6C5P-201ENST00000452388 923 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 PNPLA4P1-201ENST00000458328 305 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 NXT1P1-201ENST00000458481 316 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 NPM1P27-201ENST00000502784 830 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 WBP1LP4-201ENST00000505043 344 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC022296.2-201ENST00000512424 202 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AL035413.2-201ENST00000604801 525 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC116563.2-201ENST00000624751 535 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC079228.1-201ENST00000624774 1049 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AL049541.2-201ENST00000626377 555 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 ICE2P1-201ENST00000512800 1849 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 HSPD1P4-201ENST00000547203 1702 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 AL353763.1-201ENST00000624467 1628 ntBASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RSPO4Q2I0M5 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 AL391261.1-201ENST00000555712 1479 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 Y_RNA.67-201ENST00000362870 100 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 RNA5SP443-201ENST00000363083 132 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 RN7SKP106-201ENST00000410832 272 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 HMGB3P23-201ENST00000414981 585 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 RPL23AP39-201ENST00000415533 405 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 USP9YP27-201ENST00000418455 438 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 ARAFP1-201ENST00000422172 605 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 RPL23AP76-201ENST00000441860 458 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 CEACAMP4-201ENST00000457676 421 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 RN7SL284P-201ENST00000498823 275 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 RPL7L1P4-201ENST00000513004 707 ntBASIC6.74□□□□□ -1.33
RSPO4Q2I0M5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms