Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 NHS-204ENST00000615422 8860 ntTSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 GNG5P2-201ENST00000372054 207 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 AL132765.1-201ENST00000434165 553 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 AC073410.1-201ENST00000435125 589 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 ACTR3P2-201ENST00000439585 1257 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.01□□□□□ -1.93
HSPG2P98160 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.01□□□□□ -1.93
HSPG2P98160 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.01□□□□□ -1.93
HSPG2P98160 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC3.01□□□□□ -1.93
HSPG2P98160 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HSPG2P98160 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 MAPK10-270ENST00000641102 3538 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 CADM1-203ENST00000452722 8588 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC3.01□□□□□ -1.93
HSPG2P98160 ATP5A1P4-201ENST00000556888 1605 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HSPG2P98160 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HSPG2P98160 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 ZNF415P1-201ENST00000582279 1166 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.01□□□□□ -1.93
HSPG2P98160 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC3.01□□□□□ -1.93
HSPG2P98160 AL049794.2-201ENST00000616301 365 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 ECM1P2-201ENST00000503354 1577 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HSPG2P98160 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC3.01□□□□□ -1.93
HSPG2P98160 AC068769.1-201ENST00000474767 2426 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC3.01□□□□□ -1.93
HSPG2P98160 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 AL672167.2-201ENST00000377164 879 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HSPG2P98160 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.01□□□□□ -1.93
HSPG2P98160 RN7SL441P-201ENST00000492388 296 ntBASIC3.01□□□□□ -1.93
HSPG2P98160 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.01□□□□□ -1.93
HSPG2P98160 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.01□□□□□ -1.93
HSPG2P98160 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.01□□□□□ -1.93
HSPG2P98160 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HSPG2P98160 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HSPG2P98160 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HSPG2P98160 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC3□□□□□ -1.93
HSPG2P98160 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 SNORA62.3-201ENST00000365110 153 ntBASIC3□□□□□ -1.93
HSPG2P98160 AL357515.1-201ENST00000402967 542 ntBASIC3□□□□□ -1.93
HSPG2P98160 AL356095.1-201ENST00000417217 199 ntBASIC3□□□□□ -1.93
HSPG2P98160 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3□□□□□ -1.93
HSPG2P98160 RPL17P2-201ENST00000491913 451 ntBASIC3□□□□□ -1.93
HSPG2P98160 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3□□□□□ -1.93
HSPG2P98160 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC3□□□□□ -1.93
HSPG2P98160 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3□□□□□ -1.93
HSPG2P98160 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
HSPG2P98160 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
HSPG2P98160 AC233968.1-201ENST00000611212 1300 ntBASIC3□□□□□ -1.93
HSPG2P98160 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC3□□□□□ -1.93
HSPG2P98160 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 SLC2A3P1-201ENST00000519666 1451 ntBASIC3□□□□□ -1.93
HSPG2P98160 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC3□□□□□ -1.93
HSPG2P98160 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 AC090589.1-201ENST00000473109 362 ntBASIC3□□□□□ -1.93
HSPG2P98160 MTCO1P35-201ENST00000515270 228 ntBASIC3□□□□□ -1.93
HSPG2P98160 SEPT10P1-201ENST00000517342 1162 ntBASIC3□□□□□ -1.93
HSPG2P98160 AP001357.1-201ENST00000586304 1053 ntBASIC3□□□□□ -1.93
HSPG2P98160 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC3□□□□□ -1.93
HSPG2P98160 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3□□□□□ -1.93
HSPG2P98160 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HSPG2P98160 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms