Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL034379.1-201ENST00000423216 253 ntBASIC5□□□□□ -1.61
SEC61A1P61619 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5□□□□□ -1.61
SEC61A1P61619 RPL12P18-201ENST00000437175 325 ntBASIC5□□□□□ -1.61
SEC61A1P61619 RNFT1P2-201ENST00000443064 757 ntBASIC5□□□□□ -1.61
SEC61A1P61619 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 AC073109.1-201ENST00000445066 978 ntBASIC5□□□□□ -1.61
SEC61A1P61619 AL096829.2-201ENST00000446582 742 ntBASIC5□□□□□ -1.61
SEC61A1P61619 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 AC012123.2-201ENST00000485809 248 ntBASIC5□□□□□ -1.61
SEC61A1P61619 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A1P61619 AC093770.1-201ENST00000511559 571 ntBASIC5□□□□□ -1.61
SEC61A1P61619 NPM1P21-201ENST00000513394 762 ntBASIC5□□□□□ -1.61
SEC61A1P61619 SCARNA18.1-201ENST00000516330 83 ntBASIC5□□□□□ -1.61
SEC61A1P61619 AC078899.1-201ENST00000521432 1185 ntBASIC5□□□□□ -1.61
SEC61A1P61619 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5□□□□□ -1.61
SEC61A1P61619 EEF1A1P37-201ENST00000522748 715 ntBASIC5□□□□□ -1.61
SEC61A1P61619 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A1P61619 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 AC005244.1-201ENST00000582566 339 ntBASIC5□□□□□ -1.61
SEC61A1P61619 AC008521.2-201ENST00000591021 259 ntBASIC5□□□□□ -1.61
SEC61A1P61619 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5□□□□□ -1.61
SEC61A1P61619 MIR6793-201ENST00000612376 63 ntBASIC5□□□□□ -1.61
SEC61A1P61619 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5□□□□□ -1.61
SEC61A1P61619 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 AL590396.4-201ENST00000636779 956 ntBASIC5□□□□□ -1.61
SEC61A1P61619 ATM-229ENST00000639953 587 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A1P61619 HSPD1P14-201ENST00000432666 1618 ntBASIC5□□□□□ -1.61
SEC61A1P61619 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SEC61A1P61619 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 GNL2P1-201ENST00000451274 2190 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A1P61619 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A1P61619 MTCO1P15-201ENST00000529569 1526 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 AC006484.1-201ENST00000435086 1884 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 ZNF29P-201ENST00000225587 168 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 RN7SKP269-201ENST00000365545 319 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A1P61619 Z86062.1-201ENST00000406773 777 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 RANP4-201ENST00000413361 655 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 NIFKP3-201ENST00000417799 865 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 DPPA2P2-201ENST00000418220 897 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.99□□□□□ -1.61
SEC61A1P61619 TCEA1P2-201ENST00000420496 906 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 BX284632.2-201ENST00000421091 399 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A1P61619 REREP1Y-201ENST00000422655 198 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 AL606490.7-201ENST00000433136 191 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 REREP2Y-201ENST00000439103 200 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A1P61619 AL512605.1-202ENST00000441919 381 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 AC245517.2-201ENST00000442890 346 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 CYCSP51-201ENST00000443545 318 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 AL359955.2-201ENST00000445380 353 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 NPM1P19-201ENST00000450070 712 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 UBFD1P1-201ENST00000473259 814 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A1P61619 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A1P61619 AC021087.2-201ENST00000504656 1203 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 AC093720.1-201ENST00000505681 714 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 SUMO2P5-201ENST00000506790 245 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 AC069306.1-201ENST00000507006 843 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A1P61619 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A1P61619 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.99□□□□□ -1.61
SEC61A1P61619 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A1P61619 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A1P61619 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms