Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 GVINP1-202ENST00000531871 7271 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN18P56856 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLDN18P56856 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN18P56856 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN18P56856 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN18P56856 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 RNU1-19P-201ENST00000363306 165 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CLDN18P56856 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 SOCS5P3-201ENST00000425115 1576 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 BRWD1P3-201ENST00000428816 390 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN18P56856 AC138761.5-201ENST00000433967 325 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 LYPLA1P1-201ENST00000434514 622 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN18P56856 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN18P56856 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN18P56856 Z92846.1-201ENST00000456203 268 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 AC079168.1-201ENST00000458741 345 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN18P56856 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 RPL15P21-201ENST00000495592 567 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN18P56856 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.76□□□□□ -1.65
CLDN18P56856 OR4A46P-201ENST00000527255 933 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN18P56856 AC022832.1-201ENST00000530718 645 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN18P56856 OR11J2P-201ENST00000555298 907 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN18P56856 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN18P56856 AC095055.1-201ENST00000603472 1113 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 AC108738.1-201ENST00000603703 237 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 AL121612.2-201ENST00000612261 482 ntBASIC4.76□□□□□ -1.65
CLDN18P56856 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN18P56856 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CLDN18P56856 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN18P56856 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CLDN18P56856 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 RLIMP2-201ENST00000427891 1563 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 RPL23P2-201ENST00000320371 421 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 SNORA17.1-201ENST00000362945 126 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 U8.4-201ENST00000363626 134 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLDN18P56856 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLDN18P56856 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN18P56856 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN18P56856 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN18P56856 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 RAB9AP5-201ENST00000437794 597 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 RAB9AP2-201ENST00000443911 597 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN18P56856 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN18P56856 RN7SL197P-201ENST00000466981 299 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 RPS18P6-201ENST00000476880 458 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 RPL7AP10-201ENST00000481016 791 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 SNRPCP2-201ENST00000504370 475 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.75□□□□□ -1.65
CLDN18P56856 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 HMGN1P9-201ENST00000515212 298 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 RPS27AP18-201ENST00000515536 459 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.75□□□□□ -1.65
CLDN18P56856 AC024940.3-201ENST00000538551 316 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN18P56856 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN18P56856 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN18P56856 DPRXP4-201ENST00000578053 568 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.75□□□□□ -1.65
CLDN18P56856 AC211433.2-201ENST00000608433 387 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 MIR6133-201ENST00000617057 108 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 SMG1P7-201ENST00000565246 2704 ntBASIC4.75□□□□□ -1.65
CLDN18P56856 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLDN18P56856 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.75□□□□□ -1.65
CLDN18P56856 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms