Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PKNOX1P55347 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKNOX1P55347 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PKNOX1P55347 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PKNOX1P55347 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.05□□□□□ -1.6
PKNOX1P55347 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.05□□□□□ -1.6
PKNOX1P55347 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.05□□□□□ -1.6
PKNOX1P55347 STX3-208ENST00000641815 3236 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.04□□□□□ -1.6
PKNOX1P55347 CASC19-221ENST00000641309 1382 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
PKNOX1P55347 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PKNOX1P55347 RNA5SP90-201ENST00000364801 99 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 AL035079.1-201ENST00000405210 287 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 RN7SKP286-201ENST00000410894 299 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 HSPE1P16-201ENST00000426640 348 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 OR6C71P-201ENST00000432580 913 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 AC012075.1-201ENST00000436549 580 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.04□□□□□ -1.6
PKNOX1P55347 RPS29P10-201ENST00000439197 166 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.04□□□□□ -1.6
PKNOX1P55347 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.04□□□□□ -1.6
PKNOX1P55347 RPL7P45-201ENST00000455851 743 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.04□□□□□ -1.6
PKNOX1P55347 RPL35AP19-201ENST00000469425 329 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 RPL5P16-201ENST00000471467 790 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AC097173.1-201ENST00000505862 819 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.04□□□□□ -1.6
PKNOX1P55347 KCTD9P6-201ENST00000522306 950 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 RPL10P14-201ENST00000565265 298 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 AC010547.7-201ENST00000570323 333 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 DPRXP4-201ENST00000578053 568 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 AC011840.5-201ENST00000582125 771 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AP005131.7-201ENST00000610087 611 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 RNA5SP440-201ENST00000612665 119 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 RN7SL787P-201ENST00000613000 284 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 BNIP3P41-202ENST00000616656 861 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 AP003400.2-201ENST00000624036 666 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AC103703.1-201ENST00000634783 663 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 MIR1910-201ENST00000636955 80 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 SAMMSON-209ENST00000641222 1100 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 TCP1P3-201ENST00000414406 1498 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
PKNOX1P55347 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 OR55B1P-203ENST00000641518 2602 ntBASIC5.04□□□□□ -1.6
PKNOX1P55347 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PKNOX1P55347 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PKNOX1P55347 AL731566.1-201ENST00000620490 1937 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKNOX1P55347 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.03□□□□□ -1.6
PKNOX1P55347 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKNOX1P55347 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKNOX1P55347 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PKNOX1P55347 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKNOX1P55347 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PKNOX1P55347 U3.3-201ENST00000362986 216 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.03□□□□□ -1.6
PKNOX1P55347 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.03□□□□□ -1.6
PKNOX1P55347 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PKNOX1P55347 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PKNOX1P55347 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PKNOX1P55347 RPL34P6-201ENST00000432390 345 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.03□□□□□ -1.6
PKNOX1P55347 RPL31P15-201ENST00000449770 338 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.03□□□□□ -1.6
PKNOX1P55347 RNA5SP103-201ENST00000459503 118 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 RPL7P6-201ENST00000480903 738 ntBASIC5.03□□□□□ -1.6
PKNOX1P55347 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.03□□□□□ -1.6
PKNOX1P55347 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms