Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.94□□□□□ -0.98
SMARCA2P51531 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
SMARCA2P51531 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.93□□□□□ -0.98
SMARCA2P51531 MTCO1P15-201ENST00000529569 1526 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SMARCA2P51531 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
SMARCA2P51531 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC8.93□□□□□ -0.98
SMARCA2P51531 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 IGKV7-3-201ENST00000357453 298 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 RN7SKP185-201ENST00000362813 326 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.93□□□□□ -0.98
SMARCA2P51531 PSAT1P4-201ENST00000466500 526 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 HMGN1P9-201ENST00000515212 298 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 AC005191.1-201ENST00000603950 358 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 IGKV1OR2-9-201ENST00000603957 287 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 IGKV1OR2-11-201ENST00000604120 287 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 AC104964.3-201ENST00000606115 2860 ntBASIC8.93□□□□□ -0.98
SMARCA2P51531 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC8.93□□□□□ -0.98
SMARCA2P51531 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SMARCA2P51531 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
SMARCA2P51531 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
SMARCA2P51531 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SMARCA2P51531 AC010168.2-201ENST00000562691 5428 ntBASIC8.92□□□□□ -0.98
SMARCA2P51531 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SMARCA2P51531 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA2P51531 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
SMARCA2P51531 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.92□□□□□ -0.98
SMARCA2P51531 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA2P51531 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA2P51531 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA2P51531 AL732292.1-201ENST00000426692 226 ntBASIC8.92□□□□□ -0.98
SMARCA2P51531 AL590399.2-201ENST00000427536 309 ntBASIC8.92□□□□□ -0.98
SMARCA2P51531 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.92□□□□□ -0.98
SMARCA2P51531 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.92□□□□□ -0.98
SMARCA2P51531 AC109327.1-201ENST00000471666 403 ntBASIC8.92□□□□□ -0.98
SMARCA2P51531 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
SMARCA2P51531 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC8.92□□□□□ -0.98
SMARCA2P51531 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.92□□□□□ -0.98
SMARCA2P51531 VN1R85P-201ENST00000601587 426 ntBASIC8.92□□□□□ -0.98
SMARCA2P51531 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA2P51531 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA2P51531 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SMARCA2P51531 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.92□□□□□ -0.98
SMARCA2P51531 AC093671.1-201ENST00000624981 2929 ntBASIC8.92□□□□□ -0.98
SMARCA2P51531 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.92□□□□□ -0.98
SMARCA2P51531 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.92□□□□□ -0.98
SMARCA2P51531 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA2P51531 SNORA11F-201ENST00000408237 128 ntBASIC8.91□□□□□ -0.98
SMARCA2P51531 OR2B7P-201ENST00000429302 934 ntBASIC8.91□□□□□ -0.98
SMARCA2P51531 NDUFB4P8-201ENST00000435351 367 ntBASIC8.91□□□□□ -0.98
SMARCA2P51531 AC016831.4-201ENST00000438302 307 ntBASIC8.91□□□□□ -0.98
SMARCA2P51531 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC8.91□□□□□ -0.98
SMARCA2P51531 AC005412.2-201ENST00000492004 341 ntBASIC8.91□□□□□ -0.98
SMARCA2P51531 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA2P51531 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.91□□□□□ -0.98
SMARCA2P51531 NCLP2-201ENST00000416078 1462 ntBASIC8.91□□□□□ -0.98
SMARCA2P51531 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SMARCA2P51531 AL117339.4-201ENST00000608335 7063 ntBASIC8.91□□□□□ -0.98
SMARCA2P51531 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.91□□□□□ -0.98
SMARCA2P51531 RPL31-204ENST00000409038 817 ntTSL 2 BASIC8.9□□□□□ -0.98
SMARCA2P51531 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.9□□□□□ -0.98
SMARCA2P51531 AC000111.2-201ENST00000448200 210 ntBASIC8.9□□□□□ -0.98
SMARCA2P51531 IGBP1P4-201ENST00000503202 879 ntBASIC8.9□□□□□ -0.98
SMARCA2P51531 RNU2-30P-201ENST00000516209 141 ntBASIC8.9□□□□□ -0.98
SMARCA2P51531 RN7SKP248-201ENST00000516278 305 ntBASIC8.9□□□□□ -0.98
SMARCA2P51531 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC8.9□□□□□ -0.98
SMARCA2P51531 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.9□□□□□ -0.98
SMARCA2P51531 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA2P51531 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
SMARCA2P51531 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC8.9□□□□□ -0.98
SMARCA2P51531 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
SMARCA2P51531 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
SMARCA2P51531 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
SMARCA2P51531 MAPK10-270ENST00000641102 3538 ntBASIC8.9□□□□□ -0.98
SMARCA2P51531 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.99
SMARCA2P51531 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
SMARCA2P51531 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
SMARCA2P51531 RNA5SP28-201ENST00000363841 119 ntBASIC8.9□□□□□ -0.99
SMARCA2P51531 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC8.9□□□□□ -0.99
SMARCA2P51531 AL451142.1-201ENST00000375867 775 ntBASIC8.9□□□□□ -0.99
SMARCA2P51531 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
SMARCA2P51531 SNORA70.9-201ENST00000384370 135 ntBASIC8.9□□□□□ -0.99
SMARCA2P51531 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.9□□□□□ -0.99
SMARCA2P51531 RN7SL441P-201ENST00000492388 296 ntBASIC8.9□□□□□ -0.99
SMARCA2P51531 MIR4429-201ENST00000580105 73 ntBASIC8.9□□□□□ -0.99
SMARCA2P51531 AC023575.1-201ENST00000580510 358 ntBASIC8.9□□□□□ -0.99
SMARCA2P51531 AC008782.1-201ENST00000603386 430 ntBASIC8.9□□□□□ -0.99
SMARCA2P51531 MIR6839-201ENST00000620425 113 ntBASIC8.9□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms