Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL12P48061 AC073465.2-201ENST00000440938 498 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 CYCSP42-201ENST00000450823 238 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 RBMY2TP-201ENST00000451162 947 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL12P48061 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.16□□□□□ -1.58
CXCL12P48061 SCARNA20.4-201ENST00000516969 131 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 ATP5J2P6-201ENST00000565203 266 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.16□□□□□ -1.58
CXCL12P48061 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CXCL12P48061 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CXCL12P48061 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CXCL12P48061 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL12P48061 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CXCL12P48061 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL12P48061 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.16□□□□□ -1.58
CXCL12P48061 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CXCL12P48061 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL12P48061 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CXCL12P48061 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL12P48061 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL12P48061 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL12P48061 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL12P48061 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL12P48061 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL12P48061 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CXCL12P48061 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.15□□□□□ -1.58
CXCL12P48061 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CXCL12P48061 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CXCL12P48061 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
CXCL12P48061 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 GNG5P2-201ENST00000372054 207 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 MIR298-201ENST00000401212 88 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 RPS3AP23-201ENST00000401762 784 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 RNA5SP251-201ENST00000410614 137 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.15□□□□□ -1.59
CXCL12P48061 RPL18P10-201ENST00000425606 538 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 AL356390.1-201ENST00000455684 397 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 AC022133.1-201ENST00000490961 571 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 AC011005.3-201ENST00000491624 395 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.15□□□□□ -1.59
CXCL12P48061 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 AC091912.1-201ENST00000511351 248 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL12P48061 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL12P48061 AC084824.2-201ENST00000548906 345 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 NPM1P42-201ENST00000560329 862 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 AC136624.4-201ENST00000573044 370 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 AL512782.1-201ENST00000603093 364 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 AC009237.13-201ENST00000603193 276 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 AC008814.1-201ENST00000603797 406 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 AC091932.2-201ENST00000623014 291 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
CXCL12P48061 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
CXCL12P48061 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.15□□□□□ -1.59
CXCL12P48061 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL12P48061 AC079097.1-201ENST00000512187 1399 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CXCL12P48061 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CXCL12P48061 AC093297.3-201ENST00000607056 2517 ntBASIC5.15□□□□□ -1.59
CXCL12P48061 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 AL359715.3-201ENST00000569267 2123 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CXCL12P48061 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL12P48061 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL12P48061 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CXCL12P48061 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL12P48061 AC069213.2-201ENST00000420238 366 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL12P48061 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.14□□□□□ -1.59
CXCL12P48061 RPL7P11-201ENST00000437586 658 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL12P48061 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL12P48061 OR7E125P-201ENST00000443450 846 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL12P48061 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.14□□□□□ -1.59
CXCL12P48061 AC234781.3-201ENST00000452540 973 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 AC026979.1-201ENST00000492525 396 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 FTH1P8-201ENST00000498161 514 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.14□□□□□ -1.59
CXCL12P48061 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.14□□□□□ -1.59
CXCL12P48061 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms