Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 NOP56P2-201ENST00000447491 769 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC005008.1-201ENST00000456151 612 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 RPL23AP37-201ENST00000479658 549 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC016687.1-201ENST00000482574 353 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC018639.1-201ENST00000492994 442 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 NENFP3-201ENST00000503735 313 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 STMN1P2-201ENST00000508435 439 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 MTND6P2-201ENST00000512226 524 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 RNA5SP438-201ENST00000516561 112 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC116917.1-201ENST00000520558 305 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 MRPS16P1-201ENST00000523462 412 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 AP001804.2-201ENST00000533932 910 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 SNORD39.2-201ENST00000579995 76 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC108359.1-201ENST00000616451 1211 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC006210.2-201ENST00000367074 1545 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC108751.5-201ENST00000492880 1336 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC005294.1-201ENST00000355509 281 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 RNU1-65P-201ENST00000363919 148 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 RNA5SP223-201ENST00000365174 120 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 FABP7P1-201ENST00000424004 391 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 GTF2IP2-201ENST00000424290 697 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 BX119321.1-201ENST00000428912 797 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 OR6D1P-201ENST00000436165 939 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 RPS26P2-201ENST00000440331 348 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 RPL7AP61-201ENST00000443410 636 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 RN7SL809P-201ENST00000482040 297 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 SNRPCP11-201ENST00000492453 205 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 NACAP5-201ENST00000509863 636 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC107918.3-201ENST00000533272 382 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC125612.1-201ENST00000547580 377 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 GLRXP2-201ENST00000555594 321 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 RN7SL356P-201ENST00000582228 248 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC011626.1-201ENST00000604710 562 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC015849.6-201ENST00000605454 474 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC005828.7-201ENST00000607331 556 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC009237.17-201ENST00000618111 748 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 SRRM1P3-201ENST00000426911 2678 ntBASIC4.49□□□□□ -1.69
HLA-DMAP28067 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DMAP28067 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DMAP28067 AC091305.2-201ENST00000624049 1576 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 OR14L1P-202ENST00000641545 3009 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 DDX18P3-201ENST00000404856 2007 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 VPS35P1-201ENST00000563400 1518 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 AL450326.2-201ENST00000421913 1962 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DMAP28067 COX6B1P3-201ENST00000312310 260 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DMAP28067 RNA5SP273-201ENST00000362484 113 ntBASIC4.48□□□□□ -1.69
HLA-DMAP28067 RNA5SP131-201ENST00000365452 119 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms