Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.28□□□□□ -1.72
CTSDP07339 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.28□□□□□ -1.72
CTSDP07339 NDUFB4P11-201ENST00000560510 395 ntBASIC4.28□□□□□ -1.72
CTSDP07339 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.28□□□□□ -1.72
CTSDP07339 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.28□□□□□ -1.72
CTSDP07339 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.28□□□□□ -1.72
CTSDP07339 AC008521.2-201ENST00000591021 259 ntBASIC4.28□□□□□ -1.72
CTSDP07339 AC132068.1-201ENST00000623805 459 ntBASIC4.28□□□□□ -1.72
CTSDP07339 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
CTSDP07339 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CTSDP07339 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTSDP07339 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.28□□□□□ -1.72
CTSDP07339 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTSDP07339 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.28□□□□□ -1.72
CTSDP07339 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTSDP07339 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CTSDP07339 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTSDP07339 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CTSDP07339 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.27□□□□□ -1.73
CTSDP07339 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.27□□□□□ -1.73
CTSDP07339 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 AC107068.1-201ENST00000563286 4218 ntBASIC4.27□□□□□ -1.73
CTSDP07339 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTSDP07339 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.27□□□□□ -1.73
CTSDP07339 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.27□□□□□ -1.73
CTSDP07339 RNA5SP284-201ENST00000384547 118 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AL133388.1-201ENST00000404509 287 ntBASIC4.27□□□□□ -1.73
CTSDP07339 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.27□□□□□ -1.73
CTSDP07339 TMBIM7P-201ENST00000418074 855 ntBASIC4.27□□□□□ -1.73
CTSDP07339 EIF4A1P1-201ENST00000420241 934 ntBASIC4.27□□□□□ -1.73
CTSDP07339 RPL34P3-201ENST00000421454 338 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AL662874.1-201ENST00000426065 230 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.27□□□□□ -1.73
CTSDP07339 Z84478.1-201ENST00000438230 1219 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.27□□□□□ -1.73
CTSDP07339 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.27□□□□□ -1.73
CTSDP07339 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.27□□□□□ -1.73
CTSDP07339 RPL36AP39-201ENST00000445859 318 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AC007998.1-201ENST00000474156 672 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.27□□□□□ -1.73
CTSDP07339 AC090686.1-201ENST00000481577 749 ntBASIC4.27□□□□□ -1.73
CTSDP07339 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 AC090568.1-201ENST00000509499 856 ntBASIC4.27□□□□□ -1.73
CTSDP07339 BTG4P1-201ENST00000510421 183 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AC022826.1-201ENST00000519383 805 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.27□□□□□ -1.73
CTSDP07339 AC112191.2-201ENST00000522428 333 ntBASIC4.27□□□□□ -1.73
CTSDP07339 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.27□□□□□ -1.73
CTSDP07339 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 AC116553.2-201ENST00000564203 463 ntBASIC4.27□□□□□ -1.73
CTSDP07339 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.27□□□□□ -1.73
CTSDP07339 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.27□□□□□ -1.73
CTSDP07339 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.27□□□□□ -1.73
CTSDP07339 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.27□□□□□ -1.73
CTSDP07339 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.27□□□□□ -1.73
CTSDP07339 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.27□□□□□ -1.73
CTSDP07339 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTSDP07339 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CTSDP07339 AC126323.6-202ENST00000568092 3511 ntBASIC4.26□□□□□ -1.73
CTSDP07339 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTSDP07339 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTSDP07339 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.26□□□□□ -1.73
CTSDP07339 OR56A4-201ENST00000330728 1209 ntBASIC4.26□□□□□ -1.73
CTSDP07339 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 RNU1-146P-201ENST00000364015 165 ntBASIC4.26□□□□□ -1.73
CTSDP07339 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CTSDP07339 MIR105-1-201ENST00000385222 81 ntBASIC4.26□□□□□ -1.73
CTSDP07339 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.26□□□□□ -1.73
CTSDP07339 RPS26P4-201ENST00000431743 355 ntBASIC4.26□□□□□ -1.73
CTSDP07339 RPL23AP19-201ENST00000436229 369 ntBASIC4.26□□□□□ -1.73
CTSDP07339 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.26□□□□□ -1.73
CTSDP07339 RPS11P7-201ENST00000442125 465 ntBASIC4.26□□□□□ -1.73
CTSDP07339 AC073109.1-201ENST00000445066 978 ntBASIC4.26□□□□□ -1.73
CTSDP07339 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.26□□□□□ -1.73
CTSDP07339 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTSDP07339 AC020890.1-201ENST00000491837 504 ntBASIC4.26□□□□□ -1.73
CTSDP07339 RN7SL441P-201ENST00000492388 296 ntBASIC4.26□□□□□ -1.73
CTSDP07339 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.26□□□□□ -1.73
CTSDP07339 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.26□□□□□ -1.73
CTSDP07339 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.26□□□□□ -1.73
CTSDP07339 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.26□□□□□ -1.73
CTSDP07339 AL049830.4-201ENST00000555149 351 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms