Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.95□□□□□ -1.62
MT-ND1P03886 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
MT-ND1P03886 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MT-ND1P03886 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
MT-ND1P03886 SSXP3-201ENST00000442971 1300 ntBASIC4.95□□□□□ -1.62
MT-ND1P03886 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
MT-ND1P03886 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
MT-ND1P03886 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.94□□□□□ -1.62
MT-ND1P03886 RN7SKP240-201ENST00000410583 375 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 HMGN1P20-201ENST00000411849 300 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 EEF1B2P8-201ENST00000414101 671 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 AC093155.2-201ENST00000420734 937 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 RPL34P3-201ENST00000421454 338 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 HMGB1P32-201ENST00000425971 565 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 NANOGP4-201ENST00000427230 913 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 RPL12P17-201ENST00000432393 498 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 RN7SL72P-201ENST00000460697 269 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 HMGN1P8-201ENST00000463578 288 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AC007688.1-201ENST00000475592 759 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 RPS27AP18-201ENST00000515536 459 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.94□□□□□ -1.62
MT-ND1P03886 NRBF2P4-201ENST00000520874 850 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 MTND2P7-201ENST00000521337 640 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AC018442.3-201ENST00000523025 183 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.94□□□□□ -1.62
MT-ND1P03886 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 NANOGNBP2-201ENST00000544753 553 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 AC127381.1-201ENST00000555979 939 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 RBM22P12-201ENST00000567098 1255 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 RN7SL356P-201ENST00000582228 248 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.94□□□□□ -1.62
MT-ND1P03886 FAM60CP-201ENST00000591086 664 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.94□□□□□ -1.62
MT-ND1P03886 AC012616.1-201ENST00000600294 197 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AC109583.2-201ENST00000617367 129 ntBASIC4.94□□□□□ -1.62
MT-ND1P03886 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
MT-ND1P03886 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
MT-ND1P03886 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MT-ND1P03886 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MT-ND1P03886 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MT-ND1P03886 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MT-ND1P03886 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MT-ND1P03886 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MT-ND1P03886 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
MT-ND1P03886 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MT-ND1P03886 RN7SKP74-201ENST00000362849 309 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 RNA5SP223-201ENST00000365174 120 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MT-ND1P03886 AC099535.1-201ENST00000408928 371 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 OR2AT2P-201ENST00000413438 905 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 SLC20A1P1-201ENST00000413906 956 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 OR51A6P-201ENST00000418680 1004 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.93□□□□□ -1.62
MT-ND1P03886 OR5M12P-201ENST00000423388 929 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
MT-ND1P03886 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.93□□□□□ -1.62
MT-ND1P03886 AC006455.6-201ENST00000426192 893 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.93□□□□□ -1.62
MT-ND1P03886 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.93□□□□□ -1.62
MT-ND1P03886 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.93□□□□□ -1.62
MT-ND1P03886 AL392003.1-201ENST00000434394 243 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.93□□□□□ -1.62
MT-ND1P03886 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.93□□□□□ -1.62
MT-ND1P03886 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.93□□□□□ -1.62
MT-ND1P03886 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.93□□□□□ -1.62
MT-ND1P03886 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.93□□□□□ -1.62
MT-ND1P03886 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.93□□□□□ -1.62
MT-ND1P03886 AC022133.1-201ENST00000490961 571 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 RPS24P16-201ENST00000497294 392 ntBASIC4.93□□□□□ -1.62
MT-ND1P03886 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.93□□□□□ -1.62
MT-ND1P03886 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MT-ND1P03886 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms