Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL1A1P02452 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.11□□□□□ -1.43
COL1A1P02452 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL1A1P02452 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL1A1P02452 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL1A1P02452 RNA5SP223-201ENST00000365174 120 ntBASIC6.11□□□□□ -1.43
COL1A1P02452 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.11□□□□□ -1.43
COL1A1P02452 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.11□□□□□ -1.43
COL1A1P02452 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.11□□□□□ -1.43
COL1A1P02452 AL137845.2-201ENST00000444292 988 ntBASIC6.11□□□□□ -1.43
COL1A1P02452 RPS17P2-201ENST00000461663 408 ntBASIC6.11□□□□□ -1.43
COL1A1P02452 AC006967.1-201ENST00000467608 589 ntBASIC6.11□□□□□ -1.43
COL1A1P02452 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL1A1P02452 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.11□□□□□ -1.43
COL1A1P02452 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.11□□□□□ -1.43
COL1A1P02452 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 NMNAT1P1-201ENST00000554095 876 ntBASIC6.11□□□□□ -1.43
COL1A1P02452 MTCYBP13-201ENST00000578634 1093 ntBASIC6.11□□□□□ -1.43
COL1A1P02452 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 AL512782.1-201ENST00000603093 364 ntBASIC6.11□□□□□ -1.43
COL1A1P02452 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.11□□□□□ -1.43
COL1A1P02452 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL1A1P02452 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.11□□□□□ -1.43
COL1A1P02452 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL1A1P02452 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
COL1A1P02452 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL1A1P02452 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL1A1P02452 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL1A1P02452 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL1A1P02452 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL1A1P02452 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.1□□□□□ -1.43
COL1A1P02452 RNA5SP191-201ENST00000362585 102 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 RNA5SP241-201ENST00000391326 114 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 ATP5HP3-201ENST00000396994 486 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 RPL10P10-201ENST00000403509 664 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 RPL12P9-201ENST00000412942 488 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 AF186996.5-201ENST00000418098 904 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 COX6CP17-201ENST00000421389 185 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.1□□□□□ -1.43
COL1A1P02452 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.1□□□□□ -1.43
COL1A1P02452 AL359265.2-201ENST00000434367 631 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.1□□□□□ -1.43
COL1A1P02452 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.1□□□□□ -1.43
COL1A1P02452 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.1□□□□□ -1.43
COL1A1P02452 AC098976.1-201ENST00000513014 541 ntBASIC6.1□□□□□ -1.43
COL1A1P02452 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.1□□□□□ -1.43
COL1A1P02452 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL1A1P02452 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL1A1P02452 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.1□□□□□ -1.43
COL1A1P02452 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
COL1A1P02452 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL1A1P02452 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.1□□□□□ -1.43
COL1A1P02452 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL1A1P02452 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.1□□□□□ -1.43
COL1A1P02452 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL1A1P02452 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.1□□□□□ -1.43
COL1A1P02452 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.1□□□□□ -1.43
COL1A1P02452 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 AL356317.1-201ENST00000396110 1436 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
COL1A1P02452 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 AL390316.1-201ENST00000406279 553 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 GPS2P1-201ENST00000411761 986 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.09□□□□□ -1.43
COL1A1P02452 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL1A1P02452 RN7SL443P-201ENST00000464331 290 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 AC092905.1-201ENST00000467527 949 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 AC022133.1-201ENST00000490961 571 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.09□□□□□ -1.43
COL1A1P02452 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL1A1P02452 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.09□□□□□ -1.43
COL1A1P02452 AC022884.2-201ENST00000578535 580 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 RN7SL690P-201ENST00000582087 240 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.09□□□□□ -1.43
COL1A1P02452 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.09□□□□□ -1.43
COL1A1P02452 AC108359.1-201ENST00000616451 1211 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 AC012414.7-202ENST00000622705 1090 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.09□□□□□ -1.43
COL1A1P02452 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms