Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SAMM50P1-201ENST00000455403 1399 ntBASIC5.41□□□□□ -1.54
CLDN5O00501 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.41□□□□□ -1.54
CLDN5O00501 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CLDN5O00501 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CLDN5O00501 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CLDN5O00501 NXF4-202ENST00000416098 1465 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CLDN5O00501 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN5O00501 MTHFD2P5-201ENST00000320415 844 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN5O00501 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN5O00501 RNA5SP123-201ENST00000363244 119 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CLDN5O00501 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CLDN5O00501 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN5O00501 AL590762.4-201ENST00000425885 253 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.4□□□□□ -1.54
CLDN5O00501 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN5O00501 RN7SL443P-201ENST00000464331 290 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 RPL37AP8-201ENST00000494116 276 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN5O00501 AC105420.1-201ENST00000504389 582 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 AC010350.1-201ENST00000504908 231 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.4□□□□□ -1.54
CLDN5O00501 OR1F2P-201ENST00000570470 933 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 AC022884.2-201ENST00000578535 580 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 AC023389.2-201ENST00000580031 955 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.4□□□□□ -1.54
CLDN5O00501 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.4□□□□□ -1.54
CLDN5O00501 AC026367.3-201ENST00000619032 590 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 CASC19-222ENST00000641321 1173 ntBASIC5.4□□□□□ -1.54
CLDN5O00501 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.4□□□□□ -1.55
CLDN5O00501 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN5O00501 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN5O00501 AC109446.4-201ENST00000623235 2755 ntBASIC5.4□□□□□ -1.55
CLDN5O00501 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.4□□□□□ -1.55
CLDN5O00501 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.4□□□□□ -1.55
CLDN5O00501 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.4□□□□□ -1.55
CLDN5O00501 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLDN5O00501 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CLDN5O00501 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CLDN5O00501 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN5O00501 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN5O00501 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN5O00501 AC004158.1-201ENST00000564508 4319 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN5O00501 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 RN7SKP104-201ENST00000362605 328 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 AL353625.1-202ENST00000366273 571 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN5O00501 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLDN5O00501 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN5O00501 AL390316.1-201ENST00000406279 553 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 DDX39BP1-205ENST00000422507 192 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 AC006455.6-201ENST00000426192 893 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 TRGV7-201ENST00000427089 353 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.39□□□□□ -1.55
CLDN5O00501 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN5O00501 NDUFA5P8-201ENST00000449019 346 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 BX842559.2-201ENST00000451418 605 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.39□□□□□ -1.55
CLDN5O00501 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN5O00501 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.39□□□□□ -1.55
CLDN5O00501 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN5O00501 AL583832.1-201ENST00000603227 784 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 AL713998.2-201ENST00000604538 1198 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 AC024940.4-201ENST00000605507 246 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 AC096586.2-201ENST00000610260 441 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 AC009120.7-201ENST00000623452 780 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.39□□□□□ -1.55
CLDN5O00501 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
CLDN5O00501 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN5O00501 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CLDN5O00501 AC007342.5-201ENST00000571340 2142 ntBASIC5.39□□□□□ -1.55
CLDN5O00501 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
CLDN5O00501 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CLDN5O00501 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN5O00501 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLDN5O00501 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN5O00501 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN5O00501 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CLDN5O00501 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN5O00501 ADAM24P-201ENST00000398655 2101 ntBASIC5.38□□□□□ -1.55
CLDN5O00501 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.38□□□□□ -1.55
CLDN5O00501 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN5O00501 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN5O00501 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CLDN5O00501 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms