Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC023141.9-201ENST00000458734 412 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC100832.1-201ENST00000471945 383 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC117394.1-201ENST00000477323 567 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 EIF1P7-201ENST00000487533 337 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 UGT2A3P7-201ENST00000510485 734 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC092709.1-201ENST00000521355 1045 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 RBM22P1-201ENST00000578589 1214 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 BNIP3P7-201ENST00000605641 516 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 MIR8080-201ENST00000622224 89 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 KARSP1-201ENST00000451871 1752 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 AC093909.5-201ENST00000621839 1799 ntBASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC162PA2VCL2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC093591.2-201ENST00000565254 3843 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC007996.1-201ENST00000620414 2821 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AL034370.1-201ENST00000397254 1590 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 RNU4-23P-201ENST00000362839 140 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 RNU6-1331P-201ENST00000363658 106 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 RNA5SP335-201ENST00000363817 110 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 RNA5SP242-201ENST00000364171 118 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AL359643.1-201ENST00000404109 423 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC211486.3-201ENST00000412694 621 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 RPL7AP49-201ENST00000429522 581 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AL591438.1-201ENST00000433508 581 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 RPL19P16-201ENST00000433839 588 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC097523.2-201ENST00000435551 652 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 RN7SL717P-201ENST00000478343 297 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC093827.1-201ENST00000480094 861 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 HMGB1P19-201ENST00000517578 577 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC005341.1-201ENST00000571086 708 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 RN7SL290P-201ENST00000578661 300 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AL589674.2-201ENST00000604304 337 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 AC004477.3-201ENST00000614061 590 ntBASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC162PA2VCL2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 SMG1P7-201ENST00000565246 2704 ntBASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 AC079298.1-201ENST00000625026 1619 ntBASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 AC011447.7-201ENST00000624228 1590 ntBASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 AC120338.1-201ENST00000625074 1541 ntBASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 NAP1L4P2-201ENST00000425958 899 ntBASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC162PA2VCL2 AL450263.2-201ENST00000439400 589 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms