Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPS27P23-201ENST00000487608 251 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AP003467.2-201ENST00000520175 319 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 HSPA8P13-201ENST00000523715 472 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 OR7E96P-201ENST00000530816 976 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC013283.1-201ENST00000557282 492 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC007136.1-201ENST00000589141 199 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC104785.1-201ENST00000603220 588 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC245014.2-201ENST00000603689 287 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC004852.1-201ENST00000605206 154 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC246785.4-201ENST00000605374 287 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.812-201ENST00000610788 101 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.784-201ENST00000613803 101 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.787-201ENST00000616522 101 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.780-201ENST00000617336 101 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 Y_RNA.801-201ENST00000619005 101 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL121950.1-201ENST00000624993 2077 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AL357556.1-201ENST00000421884 1388 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC087045.3-201ENST00000623046 2468 ntBASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHGA11Q9Y5H2 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 RNA5SP483-201ENST00000363431 118 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 SNRPEP2-201ENST00000397592 279 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AL049693.1-201ENST00000402760 611 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AL596448.1-201ENST00000415024 392 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC005534.2-201ENST00000431047 433 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 PSMD10P2-201ENST00000432890 672 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 TXNP5-201ENST00000441043 315 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 RPSAP49-201ENST00000445182 886 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC106872.3-201ENST00000495104 446 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC106822.1-201ENST00000502647 526 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC008629.2-201ENST00000503783 483 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 OR52H2P-201ENST00000514607 902 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 RNU6-1281P-201ENST00000516223 105 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 DPPA3P2-202ENST00000557188 1219 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR3689C-201ENST00000581239 72 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR4637-201ENST00000582405 84 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR4307-201ENST00000582802 84 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 MIR4795-201ENST00000584182 89 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AL359999.1-201ENST00000604513 294 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AL136985.2-201ENST00000607372 535 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 Z95327.3-201ENST00000610385 572 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AL136295.6-201ENST00000610486 658 ntBASIC7.18□□□□□ -1.26
PCDHGA11Q9Y5H2 AC135507.2-201ENST00000612443 309 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms