Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF6Q9Y252 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF6Q9Y252 AC144833.1-201ENST00000567953 4089 ntBASIC5.07□□□□□ -1.6
RNF6Q9Y252 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 OR1L6-202ENST00000373684 1044 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 SNORD56.6-201ENST00000384569 71 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 CASKP1-201ENST00000412870 582 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 NPM1P22-201ENST00000427761 952 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 HSPD1P12-201ENST00000429127 1069 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 SNRPFP2-201ENST00000440710 251 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC245028.2-201ENST00000458673 253 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 RN7SL727P-201ENST00000482164 296 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 HIGD1AP14-201ENST00000507617 282 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC008676.3-201ENST00000521237 435 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 OR8A2P-201ENST00000528631 952 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 AL121839.1-201ENST00000556233 1185 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC040958.1-201ENST00000561102 201 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 MRPS21P7-201ENST00000566937 238 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 MIR4472-2-201ENST00000582069 67 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC009303.3-201ENST00000591103 736 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 AC138473.1-201ENST00000605717 526 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 AL512329.2-201ENST00000607350 548 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 OR7M1P-201ENST00000608946 533 ntBASIC5.06□□□□□ -1.6
RNF6Q9Y252 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
RNF6Q9Y252 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF6Q9Y252 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RNF6Q9Y252 AC003973.3-201ENST00000624863 2822 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RNF6Q9Y252 AC068870.3-201ENST00000625077 2536 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 MRRFP1-201ENST00000435941 1675 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF6Q9Y252 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF6Q9Y252 RNA5SP234-201ENST00000363916 119 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 AC007618.1-201ENST00000366455 732 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 RPS6P23-201ENST00000413224 722 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 COX5BP7-201ENST00000414780 274 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF6Q9Y252 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF6Q9Y252 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF6Q9Y252 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RNF6Q9Y252 PRPF38AP1-201ENST00000451976 933 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 AP000547.1-201ENST00000454360 617 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 AC239798.3-201ENST00000454459 408 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 AC021660.1-201ENST00000465006 554 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 RN7SL51P-201ENST00000468230 285 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 AC004815.1-201ENST00000484185 331 ntBASIC5.05□□□□□ -1.6
RNF6Q9Y252 AC093270.2-201ENST00000486157 792 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms