Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RPS17P5-201ENST00000498293 408 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC112518.2-201ENST00000508565 425 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 RNU6-941P-201ENST00000516346 108 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 MIR4443-201ENST00000585052 53 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AP001033.2-201ENST00000609701 1003 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC090912.3-201ENST00000609775 533 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC008759.3-201ENST00000613300 508 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 AC105105.5-201ENST00000622635 1294 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.25□□□□□ -1.41
COL20A1Q9P218 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL20A1Q9P218 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL20A1Q9P218 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.25□□□□□ -1.41
COL20A1Q9P218 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 AL353796.1-201ENST00000561542 3241 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 MIR16-2-201ENST00000362117 81 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 MIR105-2-201ENST00000385083 81 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 RNU6-316P-201ENST00000391027 107 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 RNU4-34P-201ENST00000410431 124 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 AL034379.1-201ENST00000423216 253 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 MTND4LP13-201ENST00000425022 298 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 PTMAP6-201ENST00000439110 327 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 MTATP6P14-201ENST00000455189 673 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 RPL32P14-201ENST00000463196 378 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 GOLGA5P1-201ENST00000507317 980 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 RN7SKP248-201ENST00000516278 305 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 CDC42P3-201ENST00000518493 633 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 SOX5P1-201ENST00000524155 1127 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 AL049779.2-201ENST00000553847 315 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC025918.2-201ENST00000558683 763 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC106730.2-201ENST00000566641 540 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC060780.2-201ENST00000589047 198 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 AL356118.1-201ENST00000635272 1078 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 FRG1DP-201ENST00000635586 771 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 TMEM30CP-203ENST00000637814 1035 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 SAMMSON-209ENST00000641222 1100 ntBASIC6.24□□□□□ -1.41
COL20A1Q9P218 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL20A1Q9P218 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
COL20A1Q9P218 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL20A1Q9P218 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
COL20A1Q9P218 RPL11P3-201ENST00000395256 523 ntBASIC6.23□□□□□ -1.41
COL20A1Q9P218 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms