Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC122713.2-201ENST00000624942 3335 ntBASIC7.27□□□□□ -1.24
CUEDC1Q9NWM3 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC069222.1-201ENST00000608028 3360 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC003973.3-201ENST00000624863 2822 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 RNU5F-6P-201ENST00000362979 116 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 RNU5E-5P-201ENST00000365379 116 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 MIR498-201ENST00000385134 124 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 Z97832.1-201ENST00000402490 328 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 MIR548P-201ENST00000408336 84 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AL139135.1-201ENST00000412675 209 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 VDAC1P2-201ENST00000423609 850 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 OR52B5P-201ENST00000435337 951 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC239800.1-201ENST00000442049 719 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 CDC42P2-201ENST00000448566 569 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC073476.1-201ENST00000452854 407 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC108120.1-201ENST00000506543 991 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 NDUFB4P2-201ENST00000509515 391 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC117383.2-201ENST00000514722 322 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC105029.1-201ENST00000520250 669 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC107954.1-201ENST00000565906 727 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC137800.2-201ENST00000574375 120 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 RN7SL14P-201ENST00000579715 298 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 SUGT1P3-202ENST00000604259 383 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC010200.2-201ENST00000605098 235 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AL391903.2-201ENST00000614532 247 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC241377.2-202ENST00000636462 997 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AC090132.1-201ENST00000524071 1480 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AL133320.1-201ENST00000621423 2352 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 MTND5P3-201ENST00000438536 1800 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 AL157713.1-201ENST00000379752 1531 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 LYARP1-201ENST00000436977 1501 ntBASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.27□□□□□ -1.25
CUEDC1Q9NWM3 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC087045.3-201ENST00000623046 2468 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC140479.2-201ENST00000421567 3130 ntBASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUEDC1Q9NWM3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms