Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AP000357.1-201ENST00000409926 1165 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC066692.1-201ENST00000421721 457 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 NMD3P2-201ENST00000421815 761 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC002069.1-201ENST00000429649 1159 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC092447.2-201ENST00000435487 669 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AL353093.1-201ENST00000441292 436 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 CFL1P4-201ENST00000451536 498 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 RPL7P48-201ENST00000461513 746 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 NDUFA5P5-201ENST00000468361 342 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 TRBV5-2-201ENST00000489095 273 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC083795.1-201ENST00000491760 320 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC025260.1-201ENST00000548858 430 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 MTND1P24-201ENST00000552175 861 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC005244.1-201ENST00000582566 339 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 MIR548Y-201ENST00000582739 110 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AL138895.2-201ENST00000603019 178 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 RPL12P48-201ENST00000605620 304 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC093673.2-201ENST00000609674 331 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AL136097.3-201ENST00000611097 505 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 uc_338.26-201ENST00000612659 160 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 MIR6778-201ENST00000617912 73 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AP000770.2-201ENST00000623694 100 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AP003497.2-201ENST00000624220 967 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC009452.1-201ENST00000640823 606 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AC114774.1-201ENST00000507410 1770 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 AL442128.2-201ENST00000620246 1824 ntBASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NECTIN3Q9NQS3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 AF287957.1-201ENST00000607368 1595 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 RNA5SP477-201ENST00000362639 119 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 RN7SKP81-201ENST00000365603 331 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 SNORA5.1-201ENST00000384275 131 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 PEX12P1-201ENST00000400284 1048 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 HMGB3P18-201ENST00000406327 590 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 VTA1P1-201ENST00000414044 866 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 LINC01881-201ENST00000416103 412 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 USP12PY-201ENST00000427677 1064 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 OFD1P3Y-201ENST00000453312 783 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 RPL7P45-201ENST00000455851 743 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 AC092865.4-201ENST00000477936 615 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 AC124945.1-201ENST00000485133 188 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 RPL23AP40-201ENST00000487630 390 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 RN7SL193P-201ENST00000491708 276 ntBASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.63□□□□□ -1.51
NECTIN3Q9NQS3 CCDC11P1-201ENST00000503137 1162 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms