Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MTATP6P27-201ENST00000416987 621 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC012498.1-201ENST00000424037 437 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AL139158.1-201ENST00000424719 340 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 GAPDHP19-201ENST00000431768 1005 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 MTND3P21-201ENST00000433774 331 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 EMC3-AS1-205ENST00000438698 534 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AKR1D1P1-201ENST00000457236 936 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 RPS7P10-201ENST00000464254 603 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC099340.1-201ENST00000475247 599 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC096754.1-201ENST00000508904 818 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AL390198.2-201ENST00000510553 222 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 SMARCE1P4-201ENST00000523647 241 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 DEFB108A-201ENST00000530110 222 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 CYP2C60P-201ENST00000566088 139 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC005726.4-201ENST00000582858 458 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC018714.1-201ENST00000605028 208 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AL021368.3-201ENST00000607119 578 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC135068.5-201ENST00000624197 983 ntBASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.59□□□□□ -1.51
SSBP3Q9BWW4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SSBP3Q9BWW4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.59□□□□□ -1.52
SSBP3Q9BWW4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SSBP3Q9BWW4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.59□□□□□ -1.52
SSBP3Q9BWW4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.59□□□□□ -1.52
SSBP3Q9BWW4 PSG10P-201ENST00000501199 1500 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 CYP2G2P-201ENST00000594920 1485 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC000367.1-201ENST00000452711 1766 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 RNU6-259P-201ENST00000383999 107 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 SNORD65-201ENST00000391079 73 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 UBTFL3-201ENST00000418934 1024 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC004448.2-201ENST00000422360 586 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 CYCSP46-201ENST00000423569 204 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 ATP5F1P1-201ENST00000433775 569 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AC096632.2-201ENST00000438139 1239 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 RPL12P49-201ENST00000441100 121 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 TRIM60P18-201ENST00000441518 828 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 CRYGGP-201ENST00000443337 145 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 SSXP1-201ENST00000453640 473 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 CCDC75P1-201ENST00000469247 791 ntBASIC5.58□□□□□ -1.52
SSBP3Q9BWW4 PGBD4P1-201ENST00000473644 407 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms