Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC099677.3-201ENST00000427081 395 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 TMX2P1-201ENST00000436507 708 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 OR52E3P-201ENST00000452083 936 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 NPM1P29-201ENST00000483112 803 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 RPS17P5-201ENST00000498293 408 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC134349.2-201ENST00000535136 910 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC127024.5-201ENST00000580085 462 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 MIR3936-201ENST00000584304 110 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC017076.1-201ENST00000607613 578 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AL391834.1-201ENST00000609609 560 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 MIR6862-1-201ENST00000613016 70 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 MIR6862-2-201ENST00000614755 70 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC127024.6-201ENST00000621598 424 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AL031595.2-201ENST00000624215 19071 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 AC106872.5-201ENST00000508856 1416 ntBASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TUBA1CQ9BQE3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 THAP12P5-201ENST00000405864 2275 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MFSD8-239ENST00000641590 2479 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 RNA5SP500-201ENST00000364486 119 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 RN7SKP292-201ENST00000365522 317 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 SNORA17A-201ENST00000391185 133 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AL512504.1-201ENST00000415494 778 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 RPS4XP5-201ENST00000419038 768 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AL391987.1-201ENST00000441025 200 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MTND2P25-201ENST00000449028 610 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 PPIAP20-201ENST00000449839 135 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MORF4L1P4-201ENST00000450245 976 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AL445665.1-202ENST00000452436 324 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 C1DP3-201ENST00000455013 423 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 NXT1P1-201ENST00000458481 316 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AP000942.1-201ENST00000463969 747 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC021193.1-201ENST00000511607 420 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MIR2117-201ENST00000516780 80 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC012146.2-201ENST00000576545 416 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MIR4472-2-201ENST00000582069 67 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MIR4760-201ENST00000585040 80 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 BNIP3P40-201ENST00000596017 556 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC008147.4-201ENST00000617570 1204 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MIR6729-201ENST00000618194 65 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 SNORA17.5-201ENST00000630429 132 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 ADAM5-202ENST00000399789 1942 ntBASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TUBA1CQ9BQE3 CASC19-221ENST00000641309 1382 ntBASIC5.29□□□□□ -1.56
TUBA1CQ9BQE3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TUBA1CQ9BQE3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.29□□□□□ -1.56
TUBA1CQ9BQE3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
TUBA1CQ9BQE3 THAP12P8-201ENST00000447914 2115 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 246.9 ms