Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC099676.1-201ENST00000608886 657 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 AC100847.1-201ENST00000611316 481 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 AC022106.1-201ENST00000612834 766 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 AC131159.1-201ENST00000621854 213 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 AL122023.1-201ENST00000622847 530 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 AC114546.4-201ENST00000624413 369 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 MFSD8-245ENST00000641743 948 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VRK1Q99986 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
VRK1Q99986 AC006042.3-201ENST00000454684 1469 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK1Q99986 AC011369.2-201ENST00000624423 1567 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.62□□□□□ -1.51
VRK1Q99986 NLRP3P1-201ENST00000622303 1785 ntBASIC5.62□□□□□ -1.51
VRK1Q99986 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VRK1Q99986 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VRK1Q99986 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VRK1Q99986 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VRK1Q99986 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK1Q99986 NACA3P-201ENST00000359690 648 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 Y_RNA.169-201ENST00000363745 96 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 SNORA62.2-201ENST00000364672 152 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK1Q99986 LCN1P2-201ENST00000372030 223 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 AL445238.1-204ENST00000400311 463 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 RN7SKP108-201ENST00000411367 328 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC090960.1-201ENST00000421072 306 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 KCTD9P1-201ENST00000430462 1167 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK1Q99986 DEFA9P-201ENST00000433042 285 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK1Q99986 COX7BP2-201ENST00000437976 242 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 CYCSP51-201ENST00000443545 318 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 AC062022.1-201ENST00000451026 1684 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK1Q99986 CCNJP2-201ENST00000457810 1163 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AC096741.1-201ENST00000472250 846 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK1Q99986 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 RNU6-1129P-201ENST00000515964 104 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AC008429.2-201ENST00000523057 864 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AP005639.1-201ENST00000526939 192 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AC135983.3-201ENST00000528049 1226 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 MTND2P26-201ENST00000528255 1029 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AP005435.3-201ENST00000531260 3198 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.61□□□□□ -1.51
VRK1Q99986 RPL3P13-201ENST00000550415 216 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC026956.1-201ENST00000558741 396 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK1Q99986 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.61□□□□□ -1.51
VRK1Q99986 Z99497.2-201ENST00000603634 310 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AC018638.7-201ENST00000605836 1114 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC096992.2-201ENST00000609553 1684 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 AL450489.1-201ENST00000612071 468 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AL592148.2-201ENST00000612210 372 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 MIR6806-201ENST00000622141 64 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
VRK1Q99986 AL121936.2-201ENST00000641935 662 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VRK1Q99986 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
VRK1Q99986 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 AL359976.1-201ENST00000418655 3528 ntBASIC5.61□□□□□ -1.51
VRK1Q99986 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
VRK1Q99986 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms