Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC093166.3-201ENST00000448785 303 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 OR52I1-201ENST00000450052 1050 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 RPS27AP2-201ENST00000457576 465 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC021074.2-201ENST00000468434 172 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC026826.1-201ENST00000493002 361 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC008837.2-201ENST00000513076 418 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 Y_RNA.702-201ENST00000516843 96 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 RN7SL270P-201ENST00000579643 281 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 MIR4502-201ENST00000580432 81 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC078795.3-201ENST00000602913 472 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 IMMP1LP1-201ENST00000605170 488 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC069545.1-201ENST00000605671 358 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC007038.2-201ENST00000608095 740 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC091768.1-201ENST00000609258 930 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC087821.2-201ENST00000637086 450 ntBASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CCDC85AQ96PX6 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AP002364.1-201ENST00000623330 3386 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 RNU6-1011P-201ENST00000384668 107 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 OR6C69P-201ENST00000394268 893 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 OSTCP4-201ENST00000424397 449 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 USP9YP18-201ENST00000425912 695 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AC108479.1-201ENST00000431142 427 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 EIF3EP1-201ENST00000433978 1316 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AC245452.2-201ENST00000435222 392 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 MROH3P-201ENST00000435735 2676 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 RN7SL834P-201ENST00000461450 286 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AP002884.1-201ENST00000479691 655 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AC041039.1-201ENST00000485656 536 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AC079395.1-201ENST00000510981 262 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 HSD3BP3-201ENST00000514706 994 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 PRELID3BP4-201ENST00000515476 571 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 SCARNA5-201ENST00000516201 276 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AP005901.5-201ENST00000545779 1796 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 RPL3P13-201ENST00000550415 216 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AC009101.1-201ENST00000568135 242 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 RN7SL475P-201ENST00000583379 298 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AL159169.3-201ENST00000608871 561 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 AC138932.5-201ENST00000617759 563 ntBASIC8.16□□□□□ -1.1
CCDC85AQ96PX6 MIR6778-201ENST00000617912 73 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms