Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 AL162431.4-201ENST00000604674 411 ntBASIC5.37□□□□□ -1.55
C9orf72Q96LT7 AC073869.10-201ENST00000642016 354 ntBASIC5.37□□□□□ -1.55
C9orf72Q96LT7 AC235565.1-201ENST00000456962 1325 ntBASIC5.37□□□□□ -1.55
C9orf72Q96LT7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 HSPA8P14-201ENST00000552265 1805 ntBASIC5.37□□□□□ -1.55
C9orf72Q96LT7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.37□□□□□ -1.55
C9orf72Q96LT7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 Z95331.1-201ENST00000623075 23112 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 EI24P3-201ENST00000399046 1062 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 OR4K12P-201ENST00000406538 961 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 CTSL3P-202ENST00000412179 788 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AL445213.1-201ENST00000412589 747 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 CYCSP24-201ENST00000445119 316 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 RPL7P45-201ENST00000455851 743 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 RN7SL799P-201ENST00000475891 298 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 RPL7P39-201ENST00000481157 744 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 UBA52P7-201ENST00000486088 380 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 FTH1P11-201ENST00000517577 551 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AP006245.2-201ENST00000522004 300 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AC078878.1-201ENST00000539832 958 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 SAMMSON-209ENST00000641222 1100 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AL603750.1-201ENST00000624216 1717 ntBASIC5.36□□□□□ -1.55
C9orf72Q96LT7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
C9orf72Q96LT7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 RNA5SP223-201ENST00000365174 120 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 RNU6-171P-201ENST00000384354 107 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AL133388.1-201ENST00000404509 287 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AC104333.2-201ENST00000422630 192 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AL627308.1-201ENST00000435693 821 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AC012512.1-201ENST00000446594 718 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AL157385.1-201ENST00000446973 268 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 RN7SL423P-201ENST00000486202 304 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 RN7SL30P-201ENST00000488416 306 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 USP9YP2-201ENST00000504503 1000 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 USP9YP1-201ENST00000513521 1002 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AC005341.1-201ENST00000571086 708 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 RN7SL708P-201ENST00000580952 299 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 AC008115.4-201ENST00000619780 775 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 MIR6719-201ENST00000622428 87 ntBASIC5.35□□□□□ -1.55
C9orf72Q96LT7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
C9orf72Q96LT7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
C9orf72Q96LT7 AC019072.1-201ENST00000604535 1551 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms