Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC118658.2-201ENST00000618697 459 ntBASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 AC007342.5-201ENST00000571340 2142 ntBASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.23□□□□□ -1.57
ECHDC3Q96DC8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC093849.1-201ENST00000563631 2209 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 OR1L6-202ENST00000373684 1044 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC092647.2-201ENST00000452998 253 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC097484.1-201ENST00000471148 389 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC016180.1-201ENST00000567945 403 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 AP005432.2-201ENST00000608162 586 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 GVINP1-202ENST00000531871 7271 ntBASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ECHDC3Q96DC8 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.21□□□□□ -1.57
ECHDC3Q96DC8 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 RNA5SP507-201ENST00000363603 121 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 RNU6-233P-201ENST00000410845 141 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AC211486.3-201ENST00000412694 621 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 RPL23AP27-201ENST00000415161 451 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 GAPDHP58-201ENST00000438477 1006 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 KNOP1P3-201ENST00000446933 426 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 RN7SL515P-201ENST00000463999 297 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 RPS18P6-201ENST00000476880 458 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AC090114.3-201ENST00000479267 829 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AC097173.1-201ENST00000505862 819 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AC027369.5-201ENST00000533838 755 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 RPSAP73-201ENST00000614820 330 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 AC114947.2-201ENST00000565748 2125 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 MRRFP1-201ENST00000435941 1675 ntBASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.21□□□□□ -1.58
ECHDC3Q96DC8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms