Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 FBXL21-201ENST00000297158 1305 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 SNORA64.1-201ENST00000362600 132 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 RNU1-136P-201ENST00000384181 164 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC005522.1-201ENST00000395416 346 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC079355.1-201ENST00000421770 223 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 MTCYBP21-201ENST00000443300 1113 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AL445665.1-202ENST00000452436 324 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC092691.2-201ENST00000461787 803 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 RPL32P14-201ENST00000463196 378 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC093801.2-201ENST00000503966 1050 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC105384.2-201ENST00000508433 640 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC106872.4-201ENST00000510050 523 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC091078.2-201ENST00000557145 559 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 CBX3P2-202ENST00000583365 535 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AL355816.2-201ENST00000610049 647 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC016597.2-201ENST00000613256 341 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC068880.4-201ENST00000623082 495 ntBASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHMP4CQ96CF2 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 MTCO1P11-201ENST00000429111 1528 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AP000568.1-201ENST00000282964 442 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 U3.10-201ENST00000364459 214 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 SNORA72.3-201ENST00000365074 132 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 RNU4-27P-201ENST00000410889 139 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AL357752.1-201ENST00000412817 349 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC006065.1-201ENST00000422539 802 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC093084.1-201ENST00000424233 687 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 PRUNEP1-201ENST00000425846 705 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 SNORD125-201ENST00000459538 96 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 RN7SL717P-201ENST00000478343 297 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 SYT14P1-201ENST00000481459 721 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC111000.6-201ENST00000514471 709 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 DUX4L52-201ENST00000549363 777 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC079600.1-201ENST00000550326 297 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 SNORD39.2-201ENST00000579995 76 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AL158050.2-201ENST00000605336 568 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC073137.1-201ENST00000605636 634 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC019131.2-201ENST00000609071 870 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AP001033.2-201ENST00000609701 1003 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 OR8G7P-201ENST00000616658 848 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AL158062.1-201ENST00000619632 745 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AC023510.2-201ENST00000622162 746 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 CASC19-260ENST00000641828 2001 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 AL359715.4-201ENST00000606629 1436 ntBASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHMP4CQ96CF2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHMP4CQ96CF2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHMP4CQ96CF2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHMP4CQ96CF2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.81□□□□□ -1.32
CHMP4CQ96CF2 SRRM1P3-201ENST00000426911 2678 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms