Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 AC232271.1-201ENST00000602455 2715 ntBASIC6.06□□□□□ -1.44
HERVK_113Q902F9 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 AC022905.1-201ENST00000503430 3048 ntBASIC6.06□□□□□ -1.44
HERVK_113Q902F9 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HERVK_113Q902F9 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 PANDAR-201ENST00000629595 1506 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AP004607.3-201ENST00000530354 3915 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC132825.1-201ENST00000463573 2247 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 RNU4-4P-201ENST00000364588 130 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 MIR130A-201ENST00000385274 89 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 CYB5AP4-201ENST00000396692 399 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC013442.1-201ENST00000397347 228 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL353626.3-201ENST00000413399 657 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL357078.2-201ENST00000416486 427 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC093655.2-201ENST00000425735 631 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL731534.1-201ENST00000434711 269 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 HMGB3P10-201ENST00000434734 572 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL451136.1-201ENST00000435399 325 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL590762.3-201ENST00000436372 640 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC009963.4-201ENST00000448535 339 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 RN7SL165P-201ENST00000477476 291 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 MTCO1P31-201ENST00000506355 492 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 MTND1P36-201ENST00000522384 936 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AP003049.1-201ENST00000529418 457 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC005084.1-201ENST00000605160 304 ntBASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HERVK_113Q902F9 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC114947.2-201ENST00000565748 2125 ntBASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 RAD1P1-201ENST00000231383 813 ntBASIC6.04□□□□□ -1.44
HERVK_113Q902F9 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC073508.1-201ENST00000428866 656 ntBASIC6.04□□□□□ -1.44
HERVK_113Q902F9 RBMY2QP-201ENST00000429799 1147 ntBASIC6.04□□□□□ -1.44
HERVK_113Q902F9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC096775.1-201ENST00000437724 448 ntBASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 RN7SL481P-201ENST00000477764 299 ntBASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC034244.2-201ENST00000514668 858 ntBASIC6.04□□□□□ -1.44
HERVK_113Q902F9 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.04□□□□□ -1.44
HERVK_113Q902F9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms