Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC090948.1-201ENST00000607464 549 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC093388.1-201ENST00000609166 430 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 RNA5SP90-201ENST00000364801 99 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 CASKP1-201ENST00000412870 582 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 GTF2IP5-201ENST00000414608 731 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 RAD23BP1-201ENST00000421404 1227 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 RPS4XP16-201ENST00000427198 791 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC010618.1-201ENST00000469924 477 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 PPIAP9-201ENST00000403866 498 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AL137845.2-201ENST00000444292 988 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 MED28P5-201ENST00000528254 438 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC068446.1-201ENST00000556425 1549 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 VN1R85P-201ENST00000601587 426 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC015799.1-201ENST00000622996 3122 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 MSL3P1-202ENST00000440028 1468 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 SNORA2.3-201ENST00000383920 135 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 SNORA70F-201ENST00000384142 135 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 RNU1-45P-201ENST00000517191 141 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC024941.1-201ENST00000612250 334 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC112200.1-201ENST00000625015 234 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC104964.3-201ENST00000606115 2860 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 MIR298-201ENST00000401212 88 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 RPL7P32-201ENST00000457119 744 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC012400.1-201ENST00000518452 381 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 MFSD8-220ENST00000641243 1422 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms