Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AK4P6-201ENST00000505168 528 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 COL6A4P2-205ENST00000509855 506 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC138938.1-201ENST00000515431 782 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC022360.1-201ENST00000521058 340 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AP001804.2-201ENST00000533932 910 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AL731537.2-201ENST00000561565 951 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC011500.1-201ENST00000601963 469 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC005828.7-201ENST00000607331 556 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AL122125.1-201ENST00000616999 600 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC109583.2-201ENST00000617367 129 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AL162233.1-201ENST00000620014 944 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 MIR6839-201ENST00000620425 113 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC015722.2-201ENST00000622210 551 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AP000648.2-201ENST00000624182 404 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC111152.1-202ENST00000635848 339 ntBASIC4.56□□□□□ -1.68
BEST4Q8NFU0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BEST4Q8NFU0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC087565.3-202ENST00000642085 1603 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 OR9G4-201ENST00000302957 984 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 COX6B1P3-201ENST00000312310 260 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 RN7SKP28-201ENST00000364770 305 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 RMRPP5-201ENST00000411156 267 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AL359885.1-201ENST00000415786 903 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 RPL36AP10-201ENST00000421785 322 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 MTCO1P45-201ENST00000431457 267 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 ZFAND6P1-201ENST00000434138 605 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 MRPS33P4-201ENST00000434892 317 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 KF459542.1-201ENST00000450908 553 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AP000942.1-201ENST00000463969 747 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC018797.1-201ENST00000510791 255 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 RNA5SP303-201ENST00000516192 130 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 HMGB1P19-201ENST00000517578 577 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC026688.1-201ENST00000520639 1168 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AP000648.1-201ENST00000529682 397 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 HMGB1P42-201ENST00000532126 553 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 OR1E3-201ENST00000575608 948 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC092474.3-201ENST00000603022 568 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 HMGB1P51-201ENST00000605166 638 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AL031601.1-201ENST00000605702 394 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC015802.5-201ENST00000607478 399 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 OR8G7P-201ENST00000616658 848 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC073592.7-201ENST00000623659 507 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 SOCS5P3-201ENST00000425115 1576 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
BEST4Q8NFU0 MRE11P1-201ENST00000464884 2127 ntBASIC4.55□□□□□ -1.68
BEST4Q8NFU0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms