Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC022133.1-201ENST00000490961 571 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 MTATP6P1-201ENST00000514057 681 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AC040958.1-201ENST00000561102 201 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AL357153.4-201ENST00000620487 1016 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 SNORA17.5-201ENST00000630429 132 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 STX3-208ENST00000641815 3236 ntBASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ZNF439Q8NDP4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 MIR589-201ENST00000385238 99 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 RNA5SP339-201ENST00000390987 122 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 RNA5SP178-201ENST00000410380 128 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC012512.1-201ENST00000446594 718 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 PRPF38AP1-201ENST00000451976 933 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC104634.1-201ENST00000452720 462 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC023141.9-201ENST00000458734 412 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 RPEP1-201ENST00000504507 658 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 HMGB1P40-201ENST00000525121 540 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 SUGT1P3-202ENST00000604259 383 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC005252.1-201ENST00000604518 1063 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AL162431.4-201ENST00000604674 411 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC011626.1-201ENST00000604710 562 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 BNIP3P41-202ENST00000616656 861 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AF117829.2-201ENST00000619538 361 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC091932.2-201ENST00000623014 291 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 SAMMSON-227ENST00000642114 1199 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 AC023421.1-201ENST00000590535 1785 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 ADAM5-202ENST00000399789 1942 ntBASIC4.34□□□□□ -1.71
ZNF439Q8NDP4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
ZNF439Q8NDP4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.34□□□□□ -1.72
ZNF439Q8NDP4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ZNF439Q8NDP4 BRAFP1-201ENST00000445336 2703 ntBASIC4.34□□□□□ -1.72
ZNF439Q8NDP4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
ZNF439Q8NDP4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ZNF439Q8NDP4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ZNF439Q8NDP4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC006210.2-201ENST00000367074 1545 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC092111.2-201ENST00000611627 1414 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 OR9K1P-201ENST00000326513 941 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AC005294.1-201ENST00000355509 281 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 AL390774.1-201ENST00000411924 246 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 RPL12P9-201ENST00000412942 488 ntBASIC4.33□□□□□ -1.72
ZNF439Q8NDP4 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms