Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TTC9CQ8N5M4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.17□□□□□ -1.74
TTC9CQ8N5M4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 MIR589-201ENST00000385238 99 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 RNA5SP339-201ENST00000390987 122 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 OR8V1P-201ENST00000395193 873 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 OR4K12P-201ENST00000406538 961 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AL390774.1-201ENST00000411924 246 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 FAM96AP1-201ENST00000430879 482 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 RPL34P6-201ENST00000432390 345 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 SETP20-201ENST00000457046 852 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 RN7SL814P-201ENST00000487715 300 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC006427.1-201ENST00000514359 712 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC027369.5-201ENST00000533838 755 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AP002373.2-201ENST00000541631 1060 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 SNORD95-201ENST00000579879 68 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC011626.1-201ENST00000604710 562 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC004477.3-201ENST00000614061 590 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC007204.2-201ENST00000615022 616 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 FRG1EP-201ENST00000634469 770 ntBASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
TTC9CQ8N5M4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TTC9CQ8N5M4 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.15□□□□□ -1.74
TTC9CQ8N5M4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 OR9K1P-201ENST00000326513 941 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 RNA5SP132-201ENST00000364725 118 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 MIR105-1-201ENST00000385222 81 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 RNU1-77P-201ENST00000390868 162 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 COX5BP7-201ENST00000414780 274 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AL513325.1-201ENST00000417716 1034 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AC093655.2-201ENST00000425735 631 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AL121776.1-201ENST00000429337 372 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 CYCSP6-201ENST00000434498 302 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 CLUHP1-201ENST00000435012 1190 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AL450263.2-201ENST00000439400 589 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 SPRYD7P1-201ENST00000443861 570 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 NOP56P2-201ENST00000447491 769 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AC104634.1-201ENST00000452720 462 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AC007386.1-201ENST00000455212 582 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 RN7SL189P-201ENST00000468631 289 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 RN7SL184P-201ENST00000488308 297 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 RPEP1-201ENST00000504507 658 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 RNA5SP373-201ENST00000517271 95 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AC126177.5-201ENST00000549599 178 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AC106730.2-201ENST00000566641 540 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 RN7SL708P-201ENST00000580952 299 ntBASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.15□□□□□ -1.75
TTC9CQ8N5M4 AC005840.5-201ENST00000619166 599 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms