Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL049777.1-201ENST00000622740 518 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 OR11H2-202ENST00000641517 1085 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC008432.1-201ENST00000615912 1320 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 MFSD8-219ENST00000641228 2559 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 CASC19-284ENST00000642142 1868 ntBASIC5.94□□□□□ -1.46
CCDC38Q502W7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC38Q502W7 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
CCDC38Q502W7 AC097461.1-201ENST00000568928 2821 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC093225.1-201ENST00000506867 1408 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 RPS27AP11-201ENST00000402798 447 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC010385.1-201ENST00000412374 256 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AL158825.1-201ENST00000414735 521 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 RNGTTP1-201ENST00000420965 728 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 VN1R21P-201ENST00000426703 765 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AL035458.1-201ENST00000433096 585 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 BMS1P10-201ENST00000443754 1120 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC069540.1-201ENST00000446320 988 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 GXYLT1P1-201ENST00000446657 490 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC096741.1-201ENST00000472250 846 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 RPSAP51-201ENST00000497462 645 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AP000859.1-201ENST00000525536 307 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC133794.1-201ENST00000602731 914 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 NANOGP3-201ENST00000605855 286 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC026741.1-201ENST00000605892 482 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AL391834.1-201ENST00000609609 560 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC007786.3-201ENST00000615154 596 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 CASC19-274ENST00000642018 970 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC38Q502W7 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC38Q502W7 AC083899.2-201ENST00000423285 1376 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 AP004607.3-201ENST00000530354 3915 ntBASIC5.93□□□□□ -1.46
CCDC38Q502W7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC104966.1-201ENST00000467010 1464 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 RN7SKP145-201ENST00000363291 303 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 RNU1-65P-201ENST00000363919 148 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC38Q502W7 SETP15-201ENST00000412724 337 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AC013410.2-201ENST00000422627 201 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 PNRC2P1-201ENST00000423940 420 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 DPY19L1P2-201ENST00000426647 915 ntBASIC5.92□□□□□ -1.46
CCDC38Q502W7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC38Q502W7 ATP5LP2-201ENST00000440646 311 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms