Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 RN7SKP16-201ENST00000410180 299 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 KATNBL1P2-201ENST00000433311 835 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 RPL7AP61-201ENST00000443410 636 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 KNOP1P3-201ENST00000446933 426 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AC083982.1-201ENST00000485679 344 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AC090286.3-201ENST00000573133 187 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 BNIP3P35-201ENST00000604530 490 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AC108359.1-201ENST00000616451 1211 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 AC022417.1-201ENST00000624768 1303 ntBASIC6.24□□□□□ -1.41
RFX7Q2KHR2 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
RFX7Q2KHR2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 RN7SKP95-201ENST00000362860 303 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 RNA5SP123-201ENST00000363244 119 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 SNORA51.8-201ENST00000384234 132 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 RPL21P67-201ENST00000402896 478 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AL390316.1-201ENST00000406279 553 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AL360081.1-201ENST00000428299 555 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 Z80107.2-201ENST00000445127 392 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AC021660.1-201ENST00000465006 554 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 RN7SL441P-201ENST00000492388 296 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 OR51A1P-201ENST00000511110 946 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 MFSD8-216ENST00000641147 4009 ntBASIC6.23□□□□□ -1.41
RFX7Q2KHR2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.23□□□□□ -1.41
RFX7Q2KHR2 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 AC004656.1-201ENST00000568479 4951 ntBASIC6.22□□□□□ -1.41
RFX7Q2KHR2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 AC104837.2-201ENST00000427236 424 ntBASIC6.22□□□□□ -1.41
RFX7Q2KHR2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 NDUFA5P8-201ENST00000449019 346 ntBASIC6.22□□□□□ -1.41
RFX7Q2KHR2 MORF4L1P4-201ENST00000450245 976 ntBASIC6.22□□□□□ -1.41
RFX7Q2KHR2 RPS3AP53-201ENST00000454716 778 ntBASIC6.22□□□□□ -1.41
RFX7Q2KHR2 AC020779.1-201ENST00000478757 796 ntBASIC6.22□□□□□ -1.41
RFX7Q2KHR2 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 NXF4-202ENST00000416098 1465 ntBASIC6.22□□□□□ -1.41
RFX7Q2KHR2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms