Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Z84478.1-201ENST00000438230 1219 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AC002504.1-201ENST00000438281 691 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.13□□□□□ -1.59
CLDN20P56880 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.13□□□□□ -1.59
CLDN20P56880 RPS23P2-201ENST00000463671 415 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 RN7SL174P-201ENST00000475578 289 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AC012123.2-201ENST00000485809 248 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 RN7SL101P-201ENST00000496350 279 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AC138866.2-201ENST00000508650 584 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLDN20P56880 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 HSPE1P2-201ENST00000554777 306 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 MTCO3P22-201ENST00000603219 784 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 MTATP6P2-201ENST00000603319 678 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AC011458.1-201ENST00000604034 617 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.13□□□□□ -1.59
CLDN20P56880 MIR1264-201ENST00000616374 69 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 AC016957.2-201ENST00000616998 848 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.13□□□□□ -1.59
CLDN20P56880 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.13□□□□□ -1.59
CLDN20P56880 AL390318.1-201ENST00000624564 687 ntBASIC5.13□□□□□ -1.59
CLDN20P56880 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.13□□□□□ -1.59
CLDN20P56880 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.13□□□□□ -1.59
CLDN20P56880 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.13□□□□□ -1.59
CLDN20P56880 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLDN20P56880 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLDN20P56880 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.13□□□□□ -1.59
CLDN20P56880 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 MRRFP1-201ENST00000435941 1675 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CLDN20P56880 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 RNU6-792P-201ENST00000363490 107 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 RNA5SP242-201ENST00000364171 118 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN20P56880 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLDN20P56880 RPS6P23-201ENST00000413224 722 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 NENFP1-201ENST00000419476 466 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AL354692.1-201ENST00000423044 315 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 AC005297.1-201ENST00000444765 862 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN20P56880 PPIAP20-201ENST00000449839 135 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN20P56880 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 LDHBP2-201ENST00000456969 1005 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 RN7SL72P-201ENST00000460697 269 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.12□□□□□ -1.59
CLDN20P56880 RN7SL717P-201ENST00000478343 297 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AC087672.1-201ENST00000479876 766 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN20P56880 RPS3AP15-201ENST00000483874 781 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.12□□□□□ -1.59
CLDN20P56880 TMEM97P2-201ENST00000517841 403 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN20P56880 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN20P56880 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN20P56880 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN20P56880 IGBP1P1-201ENST00000554337 1009 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AC104072.1-201ENST00000568817 668 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 SNORD95-201ENST00000579879 68 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AC126365.2-201ENST00000580630 379 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 MIR4505-201ENST00000582238 73 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AC006116.7-201ENST00000590141 756 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLDN20P56880 MIR6862-1-201ENST00000613016 70 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 MIR6862-2-201ENST00000614755 70 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AC090607.5-201ENST00000615692 224 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN20P56880 MIR6729-201ENST00000618194 65 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 AL049777.1-201ENST00000622740 518 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLDN20P56880 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 AC007938.2-201ENST00000604666 2634 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 MTND4P9-201ENST00000507819 1346 ntBASIC5.12□□□□□ -1.59
CLDN20P56880 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN20P56880 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN20P56880 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms