Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC073264.2-201ENST00000448886 166 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS2P54868 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.93□□□□□ -1.46
HMGCS2P54868 MIR3667-201ENST00000581025 74 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 AC209154.1-201ENST00000582156 337 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.93□□□□□ -1.46
HMGCS2P54868 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.93□□□□□ -1.46
HMGCS2P54868 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HMGCS2P54868 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS2P54868 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS2P54868 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS2P54868 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS2P54868 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HMGCS2P54868 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HMGCS2P54868 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGCS2P54868 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 AP000641.1-201ENST00000531988 1639 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 SDAD1P1-202ENST00000524156 2051 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 OR9G4-201ENST00000302957 984 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 RNA5SP191-201ENST00000362585 102 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 RNU1-32P-201ENST00000363937 159 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HMGCS2P54868 RPS4XP9-201ENST00000405151 780 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 NPM1P40-201ENST00000412758 733 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGCS2P54868 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 RPL5P25-201ENST00000441148 775 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 IGHV5-78-201ENST00000450948 295 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
HMGCS2P54868 RN7SKP67-201ENST00000515905 235 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 AC022360.1-201ENST00000521058 340 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 AP006289.1-201ENST00000538089 277 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGCS2P54868 AC068790.4-201ENST00000602474 263 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 AC012557.1-201ENST00000607115 611 ntBASIC5.92□□□□□ -1.46
HMGCS2P54868 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS2P54868 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS2P54868 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS2P54868 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS2P54868 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS2P54868 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
HMGCS2P54868 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS2P54868 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS2P54868 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS2P54868 AC004158.1-201ENST00000564508 4319 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS2P54868 SNORA70.9-201ENST00000384370 135 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 RPL10P10-201ENST00000403509 664 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 RPS16P5-201ENST00000406501 404 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS2P54868 RNU2-50P-201ENST00000410494 143 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGCS2P54868 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS2P54868 AF186996.5-201ENST00000418098 904 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 RPL12P43-201ENST00000420608 499 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGCS2P54868 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 OR7E125P-201ENST00000443450 846 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.91□□□□□ -1.46
HMGCS2P54868 RN7SL443P-201ENST00000464331 290 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 RN7SL481P-201ENST00000477764 299 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 RPL23AP72-201ENST00000492447 435 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS2P54868 AC097173.1-201ENST00000505862 819 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 GAPDHP56-201ENST00000506031 988 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGCS2P54868 OR4A6P-201ENST00000534364 970 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS2P54868 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS2P54868 AC091042.1-201ENST00000579213 173 ntBASIC5.91□□□□□ -1.46
HMGCS2P54868 MIR4697-201ENST00000582977 78 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms