Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 SCARNA21.2-201ENST00000516600 166 ntBASIC6.01□□□□□ -1.45
COPB1P53618 SNORA70.20-201ENST00000516848 126 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.01□□□□□ -1.45
COPB1P53618 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 CD24P2-201ENST00000565486 219 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.01□□□□□ -1.45
COPB1P53618 AP005403.1-201ENST00000579720 229 ntBASIC6.01□□□□□ -1.45
COPB1P53618 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.01□□□□□ -1.45
COPB1P53618 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 MTATP6P2-201ENST00000603319 678 ntBASIC6.01□□□□□ -1.45
COPB1P53618 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.01□□□□□ -1.45
COPB1P53618 AC087565.3-203ENST00000641018 837 ntBASIC6.01□□□□□ -1.45
COPB1P53618 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
COPB1P53618 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.01□□□□□ -1.45
COPB1P53618 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
COPB1P53618 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
COPB1P53618 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
COPB1P53618 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.01□□□□□ -1.45
COPB1P53618 SRRM1P3-201ENST00000426911 2678 ntBASIC6.01□□□□□ -1.45
COPB1P53618 SLC9B1P1-201ENST00000331172 1337 ntBASIC6□□□□□ -1.45
COPB1P53618 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
COPB1P53618 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6□□□□□ -1.45
COPB1P53618 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6□□□□□ -1.45
COPB1P53618 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
COPB1P53618 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6□□□□□ -1.45
COPB1P53618 AC069282.1-201ENST00000411911 526 ntBASIC6□□□□□ -1.45
COPB1P53618 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC6□□□□□ -1.45
COPB1P53618 OR51A6P-201ENST00000418680 1004 ntBASIC6□□□□□ -1.45
COPB1P53618 MARK2P12-201ENST00000420129 585 ntBASIC6□□□□□ -1.45
COPB1P53618 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6□□□□□ -1.45
COPB1P53618 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6□□□□□ -1.45
COPB1P53618 AL512637.2-201ENST00000431287 1256 ntBASIC6□□□□□ -1.45
COPB1P53618 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6□□□□□ -1.45
COPB1P53618 ELOCP3-201ENST00000439303 348 ntBASIC6□□□□□ -1.45
COPB1P53618 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6□□□□□ -1.45
COPB1P53618 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6□□□□□ -1.45
COPB1P53618 AC108729.2-201ENST00000476543 840 ntBASIC6□□□□□ -1.45
COPB1P53618 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6□□□□□ -1.45
COPB1P53618 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6□□□□□ -1.45
COPB1P53618 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6□□□□□ -1.45
COPB1P53618 AC034244.2-201ENST00000514668 858 ntBASIC6□□□□□ -1.45
COPB1P53618 AC026407.1-201ENST00000518369 204 ntBASIC6□□□□□ -1.45
COPB1P53618 CDC42P3-201ENST00000518493 633 ntBASIC6□□□□□ -1.45
COPB1P53618 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6□□□□□ -1.45
COPB1P53618 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6□□□□□ -1.45
COPB1P53618 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6□□□□□ -1.45
COPB1P53618 AC092121.1-201ENST00000569452 202 ntBASIC6□□□□□ -1.45
COPB1P53618 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6□□□□□ -1.45
COPB1P53618 OOSP1P2-201ENST00000579644 351 ntBASIC6□□□□□ -1.45
COPB1P53618 AP001496.3-201ENST00000580230 913 ntBASIC6□□□□□ -1.45
COPB1P53618 AC007448.1-201ENST00000582714 234 ntBASIC6□□□□□ -1.45
COPB1P53618 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6□□□□□ -1.45
COPB1P53618 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 XIST-210ENST00000602863 775 ntTSL 3 BASIC6□□□□□ -1.45
COPB1P53618 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6□□□□□ -1.45
COPB1P53618 AC048344.4-201ENST00000619744 527 ntBASIC6□□□□□ -1.45
COPB1P53618 AC095038.2-201ENST00000621464 1070 ntBASIC6□□□□□ -1.45
COPB1P53618 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6□□□□□ -1.45
COPB1P53618 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
COPB1P53618 AC097655.1-201ENST00000635075 318 ntBASIC6□□□□□ -1.45
COPB1P53618 5S_rRNA.28-201ENST00000638107 119 ntBASIC6□□□□□ -1.45
COPB1P53618 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6□□□□□ -1.45
COPB1P53618 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
COPB1P53618 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
COPB1P53618 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6□□□□□ -1.45
COPB1P53618 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
COPB1P53618 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.99□□□□□ -1.45
COPB1P53618 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
COPB1P53618 AL078595.2-201ENST00000605309 1780 ntBASIC5.99□□□□□ -1.45
COPB1P53618 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COPB1P53618 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.99□□□□□ -1.45
COPB1P53618 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COPB1P53618 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.99□□□□□ -1.45
COPB1P53618 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COPB1P53618 HMGB1P20-201ENST00000402555 677 ntBASIC5.99□□□□□ -1.45
COPB1P53618 RNU6-584P-201ENST00000410350 95 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms