Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC006065.1-201ENST00000422539 802 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC007161.1-204ENST00000423039 460 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
APOBEC1P41238 MTND6P12-201ENST00000428247 522 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AL512661.1-201ENST00000434586 1253 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC002504.1-201ENST00000438281 691 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 RNFT1P2-201ENST00000443064 757 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC073109.1-201ENST00000445066 978 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AL157827.1-201ENST00000447622 132 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 RPL31P15-201ENST00000449770 338 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 RN7SL197P-201ENST00000466981 299 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.05□□□□□ -1.6
APOBEC1P41238 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.05□□□□□ -1.6
APOBEC1P41238 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.05□□□□□ -1.6
APOBEC1P41238 OR5AM1P-201ENST00000532136 1032 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.05□□□□□ -1.6
APOBEC1P41238 MRPS21P7-201ENST00000566937 238 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 RBM22P12-201ENST00000567098 1255 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC010547.6-201ENST00000571789 193 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 CBX3P2-202ENST00000583365 535 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC112503.2-201ENST00000609005 552 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC008115.3-201ENST00000614874 549 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC025574.2-201ENST00000615621 514 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC068880.4-201ENST00000623082 495 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC008691.1-209ENST00000642094 814 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
APOBEC1P41238 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC114786.1-201ENST00000512892 1415 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.05□□□□□ -1.6
APOBEC1P41238 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
APOBEC1P41238 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOBEC1P41238 AC079298.1-201ENST00000625026 1619 ntBASIC5.05□□□□□ -1.6
APOBEC1P41238 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.05□□□□□ -1.6
APOBEC1P41238 AL138820.1-201ENST00000617901 5305 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOBEC1P41238 SPATA2P1-201ENST00000431223 2055 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 LINC02019-201ENST00000608605 2060 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
APOBEC1P41238 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
APOBEC1P41238 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
APOBEC1P41238 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
APOBEC1P41238 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
APOBEC1P41238 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
APOBEC1P41238 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.04□□□□□ -1.6
APOBEC1P41238 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
APOBEC1P41238 MIR133A2-201ENST00000347538 102 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
APOBEC1P41238 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOBEC1P41238 RNA5SP453-201ENST00000362503 119 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 RN7SKP185-201ENST00000362813 326 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
APOBEC1P41238 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
APOBEC1P41238 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOBEC1P41238 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.04□□□□□ -1.6
APOBEC1P41238 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.04□□□□□ -1.6
APOBEC1P41238 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.04□□□□□ -1.6
APOBEC1P41238 AC234781.4-201ENST00000419384 244 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.04□□□□□ -1.6
APOBEC1P41238 AL606495.1-201ENST00000422100 813 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 AL354766.1-201ENST00000423396 542 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 AL133173.1-201ENST00000423458 397 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.04□□□□□ -1.6
APOBEC1P41238 RPL7P56-201ENST00000429441 717 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 AC138761.5-201ENST00000433967 325 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.04□□□□□ -1.6
APOBEC1P41238 AC064862.4-201ENST00000442180 334 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 MTCYBP21-201ENST00000443300 1113 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 HMGN1P5-201ENST00000448591 263 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
APOBEC1P41238 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.04□□□□□ -1.6
APOBEC1P41238 AL450023.1-201ENST00000450868 751 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.04□□□□□ -1.6
APOBEC1P41238 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.04□□□□□ -1.6
APOBEC1P41238 RN7SKP157-201ENST00000516174 282 ntBASIC5.04□□□□□ -1.6
APOBEC1P41238 MTCYBP19-201ENST00000517463 1124 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms