Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.24□□□□□ -1.25
CPS1P31327 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7.24□□□□□ -1.25
CPS1P31327 AL356608.1-201ENST00000610034 820 ntBASIC7.24□□□□□ -1.25
CPS1P31327 AL138960.1-201ENST00000613838 513 ntBASIC7.24□□□□□ -1.25
CPS1P31327 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.24□□□□□ -1.25
CPS1P31327 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CPS1P31327 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC7.24□□□□□ -1.25
CPS1P31327 AC104964.3-201ENST00000606115 2860 ntBASIC7.24□□□□□ -1.25
CPS1P31327 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC7.24□□□□□ -1.25
CPS1P31327 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.24□□□□□ -1.25
CPS1P31327 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CPS1P31327 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.23□□□□□ -1.25
CPS1P31327 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CPS1P31327 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CPS1P31327 RNA5SP447-201ENST00000363749 119 ntBASIC7.23□□□□□ -1.25
CPS1P31327 AL445189.1-201ENST00000405722 338 ntBASIC7.23□□□□□ -1.25
CPS1P31327 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.23□□□□□ -1.25
CPS1P31327 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CPS1P31327 Z95327.1-201ENST00000446082 482 ntBASIC7.23□□□□□ -1.25
CPS1P31327 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CPS1P31327 CR383656.1-201ENST00000484916 377 ntBASIC7.23□□□□□ -1.25
CPS1P31327 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.23□□□□□ -1.25
CPS1P31327 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.23□□□□□ -1.25
CPS1P31327 IGKV2-23-201ENST00000518729 323 ntBASIC7.23□□□□□ -1.25
CPS1P31327 SOX5P1-201ENST00000524155 1127 ntBASIC7.23□□□□□ -1.25
CPS1P31327 AC007224.1-201ENST00000564410 144 ntBASIC7.23□□□□□ -1.25
CPS1P31327 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.23□□□□□ -1.25
CPS1P31327 AP005119.2-201ENST00000579735 1105 ntBASIC7.23□□□□□ -1.25
CPS1P31327 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.23□□□□□ -1.25
CPS1P31327 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.23□□□□□ -1.25
CPS1P31327 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC7.23□□□□□ -1.25
CPS1P31327 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC7.23□□□□□ -1.25
CPS1P31327 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CPS1P31327 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CPS1P31327 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC7.23□□□□□ -1.25
CPS1P31327 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.23□□□□□ -1.25
CPS1P31327 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CPS1P31327 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CPS1P31327 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CPS1P31327 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CPS1P31327 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CPS1P31327 AC063976.2-201ENST00000425667 3556 ntBASIC7.22□□□□□ -1.25
CPS1P31327 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 RN7SKP145-201ENST00000363291 303 ntBASIC7.22□□□□□ -1.25
CPS1P31327 SNORA70.4-201ENST00000365509 134 ntBASIC7.22□□□□□ -1.25
CPS1P31327 RNA5SP171-201ENST00000391071 115 ntBASIC7.22□□□□□ -1.25
CPS1P31327 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 AL049697.2-201ENST00000403708 294 ntBASIC7.22□□□□□ -1.25
CPS1P31327 RPL7P32-201ENST00000457119 744 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AC010618.1-201ENST00000469924 477 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AC093840.1-201ENST00000511599 336 ntBASIC7.22□□□□□ -1.25
CPS1P31327 NPM1P6-201ENST00000521088 871 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AP001804.1-201ENST00000526868 919 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AP001880.2-201ENST00000538233 448 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.22□□□□□ -1.25
CPS1P31327 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC7.22□□□□□ -1.25
CPS1P31327 AC005377.1-201ENST00000605126 456 ntBASIC7.22□□□□□ -1.25
CPS1P31327 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.22□□□□□ -1.25
CPS1P31327 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.22□□□□□ -1.25
CPS1P31327 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
CPS1P31327 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CPS1P31327 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CPS1P31327 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 AL451142.1-201ENST00000375867 775 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AC025750.1-201ENST00000399891 379 ntBASIC7.22□□□□□ -1.25
CPS1P31327 NRBF2P2-201ENST00000413087 861 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AL732292.1-201ENST00000426692 226 ntBASIC7.22□□□□□ -1.25
CPS1P31327 RPS29P10-201ENST00000439197 166 ntBASIC7.22□□□□□ -1.25
CPS1P31327 Z95152.1-201ENST00000453556 656 ntBASIC7.22□□□□□ -1.25
CPS1P31327 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.22□□□□□ -1.25
CPS1P31327 RN7SL244P-201ENST00000493405 297 ntBASIC7.22□□□□□ -1.25
CPS1P31327 RPS24P16-201ENST00000497294 392 ntBASIC7.22□□□□□ -1.25
CPS1P31327 RPSAP51-201ENST00000497462 645 ntBASIC7.22□□□□□ -1.25
CPS1P31327 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.22□□□□□ -1.25
CPS1P31327 SEPT10P1-201ENST00000517342 1162 ntBASIC7.22□□□□□ -1.25
CPS1P31327 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CPS1P31327 RPL12P25-202ENST00000598100 674 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AC005191.1-201ENST00000603950 358 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AL139124.1-201ENST00000609123 421 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.22□□□□□ -1.25
CPS1P31327 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7.22□□□□□ -1.25
CPS1P31327 AC004232.3-201ENST00000622977 525 ntBASIC7.22□□□□□ -1.25
CPS1P31327 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
CPS1P31327 AC006210.2-201ENST00000367074 1545 ntBASIC7.21□□□□□ -1.25
CPS1P31327 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms