Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 H2AFZP6-201ENST00000444403 394 ntBASIC5.25□□□□□ -1.57
HMGA1P17096 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGA1P17096 RPL5P12-201ENST00000477071 851 ntBASIC5.25□□□□□ -1.57
HMGA1P17096 AC005412.2-201ENST00000492004 341 ntBASIC5.25□□□□□ -1.57
HMGA1P17096 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGA1P17096 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGA1P17096 MORF4L1P3-201ENST00000525966 950 ntBASIC5.25□□□□□ -1.57
HMGA1P17096 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGA1P17096 AC137768.1-201ENST00000549998 553 ntBASIC5.25□□□□□ -1.57
HMGA1P17096 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGA1P17096 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGA1P17096 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGA1P17096 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGA1P17096 EIF1P5-201ENST00000585002 234 ntBASIC5.25□□□□□ -1.57
HMGA1P17096 AC005377.1-201ENST00000605126 456 ntBASIC5.25□□□□□ -1.57
HMGA1P17096 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGA1P17096 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMGA1P17096 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGA1P17096 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGA1P17096 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.25□□□□□ -1.57
HMGA1P17096 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGA1P17096 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGA1P17096 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGA1P17096 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGA1P17096 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGA1P17096 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGA1P17096 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGA1P17096 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGA1P17096 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGA1P17096 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGA1P17096 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HMGA1P17096 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGA1P17096 RPL26P29-201ENST00000415623 438 ntBASIC5.24□□□□□ -1.57
HMGA1P17096 AC007559.1-201ENST00000428736 355 ntBASIC5.24□□□□□ -1.57
HMGA1P17096 AC063943.1-201ENST00000465434 453 ntBASIC5.24□□□□□ -1.57
HMGA1P17096 AC128716.1-201ENST00000475129 166 ntBASIC5.24□□□□□ -1.57
HMGA1P17096 RN7SL441P-201ENST00000492388 296 ntBASIC5.24□□□□□ -1.57
HMGA1P17096 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGA1P17096 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGA1P17096 RNA5SP228-201ENST00000516232 133 ntBASIC5.24□□□□□ -1.57
HMGA1P17096 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGA1P17096 AL390726.5-202ENST00000564800 256 ntBASIC5.24□□□□□ -1.57
HMGA1P17096 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGA1P17096 AC022884.2-201ENST00000578535 580 ntBASIC5.24□□□□□ -1.57
HMGA1P17096 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGA1P17096 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGA1P17096 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGA1P17096 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HMGA1P17096 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGA1P17096 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGA1P17096 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HMGA1P17096 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGA1P17096 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGA1P17096 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGA1P17096 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMGA1P17096 AL021331.1-201ENST00000402817 582 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AL136116.2-201ENST00000404020 785 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 COX6CP13-201ENST00000428703 226 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AC046176.1-201ENST00000435260 1170 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGA1P17096 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGA1P17096 HMGB1P4-201ENST00000455362 567 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 RPS29P33-201ENST00000456717 146 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AC090142.2-201ENST00000483263 416 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 RPSAP51-201ENST00000497462 645 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AC098976.1-201ENST00000513014 541 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 RNA5SP392-201ENST00000516905 112 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGA1P17096 AL512310.9-201ENST00000553311 948 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGA1P17096 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.23□□□□□ -1.57
HMGA1P17096 UBE2FP2-201ENST00000566646 462 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGA1P17096 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGA1P17096 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.23□□□□□ -1.57
HMGA1P17096 AC011453.2-201ENST00000603737 729 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 AC087283.1-201ENST00000604029 1074 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 uc_338.18-201ENST00000615451 175 ntBASIC5.23□□□□□ -1.57
HMGA1P17096 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGA1P17096 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HMGA1P17096 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGA1P17096 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGA1P17096 AC099654.2-201ENST00000433031 1980 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms