Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL11A1P12107 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.73□□□□□ -1.49
COL11A1P12107 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL11A1P12107 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL11A1P12107 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.72□□□□□ -1.49
COL11A1P12107 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.72□□□□□ -1.49
COL11A1P12107 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL11A1P12107 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 GLULP6-201ENST00000399502 913 ntBASIC5.72□□□□□ -1.49
COL11A1P12107 AL049697.2-201ENST00000403708 294 ntBASIC5.72□□□□□ -1.49
COL11A1P12107 RN7SKP16-201ENST00000410180 299 ntBASIC5.72□□□□□ -1.49
COL11A1P12107 NDUFA5P9-201ENST00000472609 340 ntBASIC5.72□□□□□ -1.49
COL11A1P12107 AC092709.1-201ENST00000521355 1045 ntBASIC5.72□□□□□ -1.49
COL11A1P12107 AC012339.2-201ENST00000523996 453 ntBASIC5.72□□□□□ -1.49
COL11A1P12107 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.72□□□□□ -1.49
COL11A1P12107 AC135068.12-201ENST00000637370 931 ntBASIC5.72□□□□□ -1.49
COL11A1P12107 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL11A1P12107 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL11A1P12107 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.72□□□□□ -1.49
COL11A1P12107 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 NLRP3P1-201ENST00000622303 1785 ntBASIC5.72□□□□□ -1.49
COL11A1P12107 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.72□□□□□ -1.49
COL11A1P12107 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL11A1P12107 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
COL11A1P12107 RNU11-201ENST00000387069 134 ntBASIC5.71□□□□□ -1.49
COL11A1P12107 HYALP1-201ENST00000417674 1279 ntBASIC5.71□□□□□ -1.49
COL11A1P12107 SCAND3P1-201ENST00000439854 1060 ntBASIC5.71□□□□□ -1.49
COL11A1P12107 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.71□□□□□ -1.49
COL11A1P12107 RN7SL197P-201ENST00000466981 299 ntBASIC5.71□□□□□ -1.49
COL11A1P12107 STRADBP1-201ENST00000478954 1281 ntBASIC5.71□□□□□ -1.49
COL11A1P12107 RPSAP51-201ENST00000497462 645 ntBASIC5.71□□□□□ -1.49
COL11A1P12107 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.71□□□□□ -1.49
COL11A1P12107 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.71□□□□□ -1.49
COL11A1P12107 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.71□□□□□ -1.49
COL11A1P12107 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.71□□□□□ -1.49
COL11A1P12107 AL360012.1-201ENST00000602813 131 ntBASIC5.71□□□□□ -1.49
COL11A1P12107 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.71□□□□□ -1.49
COL11A1P12107 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.71□□□□□ -1.49
COL11A1P12107 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
COL11A1P12107 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
COL11A1P12107 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL11A1P12107 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL11A1P12107 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
COL11A1P12107 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL11A1P12107 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
COL11A1P12107 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL11A1P12107 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
COL11A1P12107 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL11A1P12107 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.71□□□□□ -1.5
COL11A1P12107 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL11A1P12107 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.71□□□□□ -1.5
COL11A1P12107 RNA5SP332-201ENST00000391063 115 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 AL049693.1-201ENST00000402760 611 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
COL11A1P12107 U3.32-201ENST00000408116 212 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 CYCSP11-201ENST00000436426 315 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 AC009963.4-201ENST00000448535 339 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 AURKAPS2-201ENST00000454983 333 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 RN7SL189P-201ENST00000468631 289 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 AC111000.6-201ENST00000514471 709 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 AL110118.1-201ENST00000553543 400 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.71□□□□□ -1.5
COL11A1P12107 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.71□□□□□ -1.5
COL11A1P12107 AP001521.2-201ENST00000608772 546 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 AL022401.1-201ENST00000619498 108 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL11A1P12107 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.71□□□□□ -1.5
COL11A1P12107 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
COL11A1P12107 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.71□□□□□ -1.5
COL11A1P12107 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL11A1P12107 AL132640.2-201ENST00000559968 1698 ntBASIC5.71□□□□□ -1.5
COL11A1P12107 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL11A1P12107 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.71□□□□□ -1.5
COL11A1P12107 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
COL11A1P12107 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.7□□□□□ -1.5
COL11A1P12107 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.7□□□□□ -1.5
COL11A1P12107 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 FAM3C2-201ENST00000312214 681 ntBASIC5.7□□□□□ -1.5
COL11A1P12107 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL11A1P12107 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL11A1P12107 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL11A1P12107 AL390316.1-201ENST00000406279 553 ntBASIC5.7□□□□□ -1.5
COL11A1P12107 FABP7P1-201ENST00000424004 391 ntBASIC5.7□□□□□ -1.5
COL11A1P12107 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.7□□□□□ -1.5
COL11A1P12107 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.7□□□□□ -1.5
COL11A1P12107 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.7□□□□□ -1.5
COL11A1P12107 RPS29P33-201ENST00000456717 146 ntBASIC5.7□□□□□ -1.5
COL11A1P12107 RN7SL319P-201ENST00000480656 221 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms