Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CHRNA1P02708 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.74□□□□□ -1.49
CHRNA1P02708 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.73□□□□□ -1.49
CHRNA1P02708 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CHRNA1P02708 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CHRNA1P02708 DDX18P6-201ENST00000450119 1997 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 AC079097.1-201ENST00000512187 1399 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CHRNA1P02708 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CHRNA1P02708 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 AL050305.1-201ENST00000399993 1230 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.73□□□□□ -1.49
CHRNA1P02708 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.73□□□□□ -1.49
CHRNA1P02708 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.73□□□□□ -1.49
CHRNA1P02708 AC079168.1-201ENST00000458741 345 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 PSAT1P4-201ENST00000466500 526 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.73□□□□□ -1.49
CHRNA1P02708 RPL7P16-201ENST00000479738 738 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 HMGN2P25-201ENST00000486956 268 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 USP9YP2-201ENST00000504503 1000 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 USP9YP1-201ENST00000513521 1002 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 OR4A43P-201ENST00000532938 908 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
CHRNA1P02708 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.73□□□□□ -1.49
CHRNA1P02708 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.73□□□□□ -1.49
CHRNA1P02708 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.73□□□□□ -1.49
CHRNA1P02708 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.73□□□□□ -1.49
CHRNA1P02708 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.73□□□□□ -1.49
CHRNA1P02708 AC015712.7-201ENST00000615211 635 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 AC135068.12-201ENST00000637370 931 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CHRNA1P02708 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.73□□□□□ -1.49
CHRNA1P02708 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CHRNA1P02708 AC138907.8-201ENST00000623981 2256 ntBASIC5.73□□□□□ -1.49
CHRNA1P02708 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHRNA1P02708 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.73□□□□□ -1.49
CHRNA1P02708 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.73□□□□□ -1.49
CHRNA1P02708 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CHRNA1P02708 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA1P02708 NXF4-202ENST00000416098 1465 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AC123912.3-201ENST00000600907 1367 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA1P02708 MIR133A2-201ENST00000347538 102 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 RNA5SP453-201ENST00000362503 119 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.72□□□□□ -1.49
CHRNA1P02708 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.72□□□□□ -1.49
CHRNA1P02708 CYB5AP4-201ENST00000396692 399 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA1P02708 AC002524.1-201ENST00000411687 547 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.72□□□□□ -1.49
CHRNA1P02708 RPL26P29-201ENST00000415623 438 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 OR2AM1P-201ENST00000422137 422 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 DDX39BP1-205ENST00000422507 192 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 RPS29P10-201ENST00000439197 166 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AC073648.4-201ENST00000442655 781 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 RPL34P20-201ENST00000442771 351 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 KNOP1P3-201ENST00000446933 426 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 RPS29P22-201ENST00000472363 168 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.72□□□□□ -1.49
CHRNA1P02708 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.72□□□□□ -1.49
CHRNA1P02708 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.72□□□□□ -1.49
CHRNA1P02708 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.72□□□□□ -1.49
CHRNA1P02708 AC009962.1-201ENST00000567327 3813 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.72□□□□□ -1.49
CHRNA1P02708 AC011487.3-201ENST00000593607 453 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AC010487.1-201ENST00000594408 1172 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AL137246.1-201ENST00000607072 977 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AC073575.2-201ENST00000614212 627 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 uc_338.7-201ENST00000621834 124 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.72□□□□□ -1.49
CHRNA1P02708 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
CHRNA1P02708 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.72□□□□□ -1.49
CHRNA1P02708 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA1P02708 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.72□□□□□ -1.49
CHRNA1P02708 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA1P02708 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.72□□□□□ -1.49
CHRNA1P02708 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.72□□□□□ -1.49
CHRNA1P02708 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA1P02708 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHRNA1P02708 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHRNA1P02708 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.71□□□□□ -1.49
CHRNA1P02708 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CHRNA1P02708 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHRNA1P02708 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CHRNA1P02708 AC109446.4-201ENST00000623235 2755 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA1P02708 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
CHRNA1P02708 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA1P02708 RN7SKP95-201ENST00000362860 303 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CHRNA1P02708 U3.28-201ENST00000391249 210 ntBASIC5.71□□□□□ -1.5
CHRNA1P02708 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms