Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PDGFBP01127 AL078599.1-201ENST00000402075 293 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFBP01127 CHEK2P3-201ENST00000416118 248 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 AC092570.3-201ENST00000420113 693 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 AC007064.3-201ENST00000422608 359 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 AC007161.1-204ENST00000423039 460 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFBP01127 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.47□□□□□ -1.53
PDGFBP01127 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.47□□□□□ -1.53
PDGFBP01127 AC239367.2-201ENST00000447309 705 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 REG1CP-206ENST00000447469 496 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 RBMY2TP-201ENST00000451162 947 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 AC234781.3-201ENST00000452540 973 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 CR383656.1-201ENST00000484916 377 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 SLC25A15P5-201ENST00000508033 253 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 AC034205.1-201ENST00000520621 638 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.47□□□□□ -1.53
PDGFBP01127 MIR4691-201ENST00000583764 85 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.47□□□□□ -1.53
PDGFBP01127 RPL26P30-202ENST00000602923 645 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 AC074140.1-201ENST00000621617 208 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PDGFBP01127 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDGFBP01127 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 KYNUP3-201ENST00000574386 1341 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 RLIMP2-201ENST00000427891 1563 ntBASIC5.46□□□□□ -1.53
PDGFBP01127 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFBP01127 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFBP01127 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PDGFBP01127 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.46□□□□□ -1.53
PDGFBP01127 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDGFBP01127 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFBP01127 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFBP01127 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFBP01127 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDGFBP01127 FAM3C2-201ENST00000312214 681 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDGFBP01127 RNU6-1320P-201ENST00000390838 107 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 RNU6-1269P-201ENST00000391139 107 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 RPSAP35-201ENST00000413753 818 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 AC015977.1-201ENST00000418887 292 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 RPL18P10-201ENST00000425606 538 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 CNOT7P1-201ENST00000429006 852 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 HSPD1P12-201ENST00000429127 1069 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.46□□□□□ -1.54
PDGFBP01127 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.46□□□□□ -1.54
PDGFBP01127 RPL7L1P3-201ENST00000455249 689 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 SEPT14P1-201ENST00000458703 648 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 RNU6-599P-201ENST00000459383 107 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 RNU6-1193P-201ENST00000459461 107 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 AC107015.1-201ENST00000466902 747 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFBP01127 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.46□□□□□ -1.54
PDGFBP01127 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.46□□□□□ -1.54
PDGFBP01127 AC244502.2-201ENST00000543361 851 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 AC139697.1-201ENST00000548429 745 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDGFBP01127 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.46□□□□□ -1.54
PDGFBP01127 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.46□□□□□ -1.54
PDGFBP01127 AC136624.4-201ENST00000573044 370 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 MIR4737-201ENST00000583979 81 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 AL513327.3-201ENST00000602618 469 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 AL138960.1-201ENST00000613838 513 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFBP01127 RNU6-368P-201ENST00000620928 107 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 RNU6-538P-201ENST00000622329 107 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 AC099654.6-201ENST00000636487 512 ntBASIC5.46□□□□□ -1.54
PDGFBP01127 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.46□□□□□ -1.54
PDGFBP01127 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PDGFBP01127 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFBP01127 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
PDGFBP01127 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
PDGFBP01127 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFBP01127 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFBP01127 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFBP01127 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDGFBP01127 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.46□□□□□ -1.54
PDGFBP01127 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
PDGFBP01127 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PDGFBP01127 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
PDGFBP01127 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
PDGFBP01127 SAMM50P1-201ENST00000455403 1399 ntBASIC5.45□□□□□ -1.54
PDGFBP01127 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PDGFBP01127 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDGFBP01127 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.45□□□□□ -1.54
PDGFBP01127 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms