Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC7.96□□□□□ -1.14
RAPGEF3O95398 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
RAPGEF3O95398 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
RAPGEF3O95398 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 DBIP1-201ENST00000401435 260 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 HSPA8P15-201ENST00000401676 786 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC013268.2-201ENST00000420753 337 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 SFR1P2-201ENST00000421841 730 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC023141.6-201ENST00000429418 337 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 ATP6V0E1P2-201ENST00000441771 245 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC006967.1-201ENST00000467608 589 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC027338.1-201ENST00000514840 825 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 RN7SKP122-201ENST00000515923 296 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 IGHVIII-2-1-201ENST00000518843 291 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 MTND5P21-201ENST00000531961 522 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC009643.1-201ENST00000532030 391 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AL163952.1-202ENST00000569625 600 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AL391358.1-201ENST00000605342 190 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC010857.1-201ENST00000606398 594 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC019193.2-201ENST00000610012 634 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AL391262.1-201ENST00000556558 1992 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
RAPGEF3O95398 AC110716.2-201ENST00000563865 3945 ntBASIC7.95□□□□□ -1.14
RAPGEF3O95398 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.95□□□□□ -1.14
RAPGEF3O95398 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.94□□□□□ -1.14
RAPGEF3O95398 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC7.94□□□□□ -1.14
RAPGEF3O95398 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 AC091046.3-201ENST00000631455 1574 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
RAPGEF3O95398 AL121886.1-201ENST00000358609 435 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
RAPGEF3O95398 AP002530.1-201ENST00000405705 684 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 RNA5SP113-201ENST00000410486 84 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 MTND4LP21-201ENST00000415303 295 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 RPS17P17-201ENST00000419392 409 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.94□□□□□ -1.14
RAPGEF3O95398 NPM1P25-201ENST00000429734 854 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC7.94□□□□□ -1.14
RAPGEF3O95398 MRPS33P4-201ENST00000434892 317 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 MTND2P30-201ENST00000456663 382 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 AL445687.2-201ENST00000458156 728 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 TRBV8-1-201ENST00000481590 279 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 ATP5LP5-201ENST00000483050 299 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 MRPS33P2-201ENST00000507850 322 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 AC026402.1-201ENST00000513642 170 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.94□□□□□ -1.14
RAPGEF3O95398 SNORA70.11-201ENST00000515987 138 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 SNORA70.13-201ENST00000516116 138 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC7.94□□□□□ -1.14
RAPGEF3O95398 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RAPGEF3O95398 TVP23CP2-201ENST00000571473 623 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 FAM60CP-201ENST00000591086 664 ntBASIC7.94□□□□□ -1.14
RAPGEF3O95398 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms