Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.73□□□□□ -1.49
MSI1O43347 AC138701.1-201ENST00000524329 714 ntBASIC5.73□□□□□ -1.49
MSI1O43347 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.73□□□□□ -1.49
MSI1O43347 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.73□□□□□ -1.49
MSI1O43347 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.73□□□□□ -1.49
MSI1O43347 AC000068.2-201ENST00000608816 460 ntBASIC5.73□□□□□ -1.49
MSI1O43347 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.73□□□□□ -1.49
MSI1O43347 AC025016.1-201ENST00000616746 682 ntBASIC5.73□□□□□ -1.49
MSI1O43347 AC008147.4-201ENST00000617570 1204 ntBASIC5.73□□□□□ -1.49
MSI1O43347 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
MSI1O43347 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MSI1O43347 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MSI1O43347 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MSI1O43347 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
MSI1O43347 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.73□□□□□ -1.49
MSI1O43347 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MSI1O43347 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MSI1O43347 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MSI1O43347 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MSI1O43347 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 OR10AB1P-202ENST00000641219 1686 ntBASIC5.72□□□□□ -1.49
MSI1O43347 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 LINC01963-201ENST00000562038 3148 ntBASIC5.72□□□□□ -1.49
MSI1O43347 RN7SKP162-201ENST00000363605 345 ntBASIC5.72□□□□□ -1.49
MSI1O43347 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.72□□□□□ -1.49
MSI1O43347 CFL1P1-202ENST00000432948 411 ntBASIC5.72□□□□□ -1.49
MSI1O43347 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.72□□□□□ -1.49
MSI1O43347 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.72□□□□□ -1.49
MSI1O43347 MTCO2P9-201ENST00000503214 694 ntBASIC5.72□□□□□ -1.49
MSI1O43347 TPT1P8-201ENST00000510120 555 ntBASIC5.72□□□□□ -1.49
MSI1O43347 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.72□□□□□ -1.49
MSI1O43347 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.72□□□□□ -1.49
MSI1O43347 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.72□□□□□ -1.49
MSI1O43347 MTND1P8-201ENST00000571424 950 ntBASIC5.72□□□□□ -1.49
MSI1O43347 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.72□□□□□ -1.49
MSI1O43347 MIR3176-201ENST00000582210 90 ntBASIC5.72□□□□□ -1.49
MSI1O43347 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
MSI1O43347 AF129408.1-201ENST00000608767 431 ntBASIC5.72□□□□□ -1.49
MSI1O43347 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.72□□□□□ -1.49
MSI1O43347 AC095038.2-201ENST00000621464 1070 ntBASIC5.72□□□□□ -1.49
MSI1O43347 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.72□□□□□ -1.49
MSI1O43347 AP000550.3-201ENST00000637734 379 ntBASIC5.72□□□□□ -1.49
MSI1O43347 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.72□□□□□ -1.49
MSI1O43347 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 AL360270.2-201ENST00000562952 5985 ntBASIC5.72□□□□□ -1.49
MSI1O43347 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.72□□□□□ -1.49
MSI1O43347 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
MSI1O43347 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
MSI1O43347 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
MSI1O43347 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MSI1O43347 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MSI1O43347 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MSI1O43347 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MSI1O43347 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.49
MSI1O43347 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
MSI1O43347 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
MSI1O43347 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
MSI1O43347 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
MSI1O43347 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MSI1O43347 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MSI1O43347 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
MSI1O43347 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MSI1O43347 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.71□□□□□ -1.5
MSI1O43347 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.71□□□□□ -1.5
MSI1O43347 ST13P16-201ENST00000401760 781 ntBASIC5.71□□□□□ -1.5
MSI1O43347 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.71□□□□□ -1.5
MSI1O43347 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.71□□□□□ -1.5
MSI1O43347 MTCO2P1-201ENST00000424648 477 ntBASIC5.71□□□□□ -1.5
MSI1O43347 RPL7P56-201ENST00000429441 717 ntBASIC5.71□□□□□ -1.5
MSI1O43347 CYCSP6-201ENST00000434498 302 ntBASIC5.71□□□□□ -1.5
MSI1O43347 CLUHP1-201ENST00000435012 1190 ntBASIC5.71□□□□□ -1.5
MSI1O43347 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.71□□□□□ -1.5
MSI1O43347 CYCSP12-201ENST00000437729 300 ntBASIC5.71□□□□□ -1.5
MSI1O43347 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.71□□□□□ -1.5
MSI1O43347 RPS23P9-201ENST00000448848 438 ntBASIC5.71□□□□□ -1.5
MSI1O43347 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.71□□□□□ -1.5
MSI1O43347 AC104849.1-201ENST00000462623 405 ntBASIC5.71□□□□□ -1.5
MSI1O43347 AC093663.2-201ENST00000484625 313 ntBASIC5.71□□□□□ -1.5
MSI1O43347 AK4P6-201ENST00000505168 528 ntBASIC5.71□□□□□ -1.5
MSI1O43347 HMGB1P47-201ENST00000511281 589 ntBASIC5.71□□□□□ -1.5
MSI1O43347 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.71□□□□□ -1.5
MSI1O43347 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.71□□□□□ -1.5
MSI1O43347 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MSI1O43347 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.71□□□□□ -1.5
MSI1O43347 AC008147.3-201ENST00000548666 354 ntBASIC5.71□□□□□ -1.5
MSI1O43347 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.71□□□□□ -1.5
MSI1O43347 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.71□□□□□ -1.5
MSI1O43347 AC007225.2-201ENST00000562529 256 ntBASIC5.71□□□□□ -1.5
MSI1O43347 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms