Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAPPC4Q9Y296 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 SMG1P7-201ENST00000565246 2704 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC079298.1-201ENST00000625026 1619 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RNU1-19P-201ENST00000363306 165 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RNA5SP335-201ENST00000363817 110 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 SNORA16A-201ENST00000384342 137 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC009804.1-201ENST00000400949 179 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AL078599.1-201ENST00000402075 293 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 BTF3P6-201ENST00000448054 499 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RN7SL174P-201ENST00000475578 289 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RPL7P40-201ENST00000481703 745 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RN7SL547P-201ENST00000490793 290 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC022133.1-201ENST00000490961 571 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC108693.1-201ENST00000496068 432 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RN7SL591P-201ENST00000496150 292 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 RN7SL101P-201ENST00000496350 279 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 HMGN1P9-201ENST00000515212 298 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 BX510359.5-201ENST00000515651 304 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC021733.2-201ENST00000518830 497 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 HMGB1P40-201ENST00000525121 540 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC244107.2-201ENST00000611773 76 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC015914.2-201ENST00000618167 288 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 BX005214.3-202ENST00000619809 325 ntBASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAPPC4Q9Y296 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
TRAPPC4Q9Y296 SMG1P4-204ENST00000523028 4131 ntBASIC4.84□□□□□ -1.64
TRAPPC4Q9Y296 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRAPPC4Q9Y296 AC083843.3-201ENST00000623679 2186 ntBASIC4.84□□□□□ -1.64
TRAPPC4Q9Y296 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.84□□□□□ -1.64
TRAPPC4Q9Y296 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TRAPPC4Q9Y296 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 MIR133B-201ENST00000362210 119 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 HSPA8P15-201ENST00000401676 786 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AL133388.1-201ENST00000404509 287 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AL445213.1-201ENST00000412589 747 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 OR13Z1P-201ENST00000416141 834 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 OR5M12P-201ENST00000423388 929 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 CYCSP12-201ENST00000437729 300 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AL391987.1-201ENST00000441025 200 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AL031584.1-201ENST00000447169 754 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 DNAJB5P1-201ENST00000454004 806 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AL035090.1-201ENST00000454835 332 ntBASIC4.83□□□□□ -1.64
TRAPPC4Q9Y296 AC079168.1-201ENST00000458741 345 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms