Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MORF4L1P4-201ENST00000450245 976 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 COX6B1P5-201ENST00000509843 249 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 RN7SKP260-201ENST00000516907 149 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 AC105254.2-201ENST00000603636 436 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 AC093799.2-201ENST00000610062 578 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 AC009163.6-201ENST00000612367 342 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 AP002799.1-201ENST00000623552 423 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 AC112694.2-201ENST00000623697 768 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
NPC1L1Q9UHC9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 SNORA5.1-201ENST00000384275 131 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 COX6CP13-201ENST00000428703 226 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 IGHV5-78-201ENST00000450948 295 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 OR7E128P-201ENST00000532736 1024 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 AC116553.2-201ENST00000564203 463 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 MIR4436B2-201ENST00000581415 91 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 MIR4436B1-201ENST00000583272 91 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 MIR6820-201ENST00000611508 62 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 AC007998.4-201ENST00000612496 2533 ntBASIC6.91□□□□□ -1.3
NPC1L1Q9UHC9 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPC1L1Q9UHC9 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPC1L1Q9UHC9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NPC1L1Q9UHC9 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.9□□□□□ -1.3
NPC1L1Q9UHC9 AC131971.1-201ENST00000332881 1482 ntBASIC6.9□□□□□ -1.3
NPC1L1Q9UHC9 AC007996.1-201ENST00000620414 2821 ntBASIC6.9□□□□□ -1.3
NPC1L1Q9UHC9 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.9□□□□□ -1.3
NPC1L1Q9UHC9 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NPC1L1Q9UHC9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AL353625.1-202ENST00000366273 571 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 SNORA56-201ENST00000383966 129 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AL589647.1-201ENST00000402485 466 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 RN7SL443P-201ENST00000464331 290 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AC004980.4-201ENST00000513375 203 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 RN7SKP66-201ENST00000516681 231 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AC100784.1-201ENST00000522790 310 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 MEMO1P5-201ENST00000604810 406 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AP001784.1-201ENST00000624107 428 ntBASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NPC1L1Q9UHC9 AC004158.1-201ENST00000564508 4319 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 AL772161.1-201ENST00000439130 476 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 CEACAMP7-201ENST00000444105 496 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 RPS18P6-201ENST00000476880 458 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 RN7SL97P-201ENST00000486780 299 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 HMGN2P25-201ENST00000486956 268 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 AL049874.2-201ENST00000492636 288 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 RNA5SP230-201ENST00000517039 122 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 OR1F2P-201ENST00000570470 933 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 AL589935.2-201ENST00000616471 1231 ntBASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.89□□□□□ -1.31
NPC1L1Q9UHC9 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms