Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC063977.7-201ENST00000594454 337 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC012368.3-201ENST00000604190 219 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC091193.1-201ENST00000604640 448 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC016877.3-201ENST00000606778 504 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AL513477.2-201ENST00000607858 568 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AL445423.1-201ENST00000609941 536 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC009237.15-201ENST00000610252 501 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC092794.1-201ENST00000612734 582 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC007494.3-201ENST00000624660 743 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AL592429.1-201ENST00000403909 1473 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 LINC01613-201ENST00000561476 2780 ntBASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
PARPBPQ9NWS1 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 STAG3L4-201ENST00000352103 530 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 RNU6-553P-201ENST00000364047 96 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 RNU4-51P-201ENST00000364206 140 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 TNPO1P1-201ENST00000423641 1138 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC096632.2-201ENST00000438139 1239 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AL627224.1-201ENST00000448334 444 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC093899.1-201ENST00000457984 376 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 RN7SL714P-201ENST00000487050 298 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC008837.1-201ENST00000511513 412 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 IGKV2-19-201ENST00000518132 283 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC104417.1-201ENST00000523974 751 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC090695.1-201ENST00000561269 1222 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 ACTR3BP3-201ENST00000565577 979 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 VN1R88P-201ENST00000596787 292 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AL135786.2-201ENST00000608422 615 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC025588.4-201ENST00000615802 908 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 VN1R7P-201ENST00000619242 903 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC048341.3-201ENST00000619323 491 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AL122023.1-201ENST00000622847 530 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC092159.4-201ENST00000624944 550 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC010325.3-201ENST00000641084 394 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
PARPBPQ9NWS1 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms